Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c00080

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
8,609	-				-2.1
8,642	-				-1.8
8,659	+				-0.8
8,662	-				+0.2
8,662	-				+0.3
8,662	-				-0.6
8,664	+				-0.2
8,667	-				-0.1
8,672	-				+1.3
8,672	-				-3.5
8,672	-				-1.7
8,672	-				+1.0
8,709	-				-1.7
8,719	-				+2.1
8,736	+				-2.0
8,736	+				+1.2
8,757	-				+0.4
8,764	-				-0.1
8,767	-				-0.2
8,767	-				+0.6
8,791	-				+0.1
8,832	+				+0.8
8,835	+				-1.7
8,837	+				-0.4
8,863	-				-1.8
8,963	+				+0.3
8,971	-				+1.5
9,012	+				-0.5
9,015	+				-1.4
9,082	+		PGA1_c00080	0.12	+1.1
9,087	+		PGA1_c00080	0.12	+0.9
9,095	-		PGA1_c00080	0.13	-0.5
9,095	-		PGA1_c00080	0.13	+1.2
9,138	-		PGA1_c00080	0.19	+1.2
9,148	+		PGA1_c00080	0.20	-2.3
9,163	+		PGA1_c00080	0.22	+0.2
9,166	-		PGA1_c00080	0.22	+2.9
9,171	-		PGA1_c00080	0.23	+1.3
9,259	-		PGA1_c00080	0.33	-0.2
9,292	+		PGA1_c00080	0.37	+0.5
9,311	+		PGA1_c00080	0.39	+1.1
9,339	-		PGA1_c00080	0.43	-2.1
9,349	-		PGA1_c00080	0.44	-0.9
9,354	+		PGA1_c00080	0.45	-0.1
9,362	-		PGA1_c00080	0.46	+0.1
9,506	-		PGA1_c00080	0.63	+0.8
9,636	-		PGA1_c00080	0.79	+1.0
9,651	-		PGA1_c00080	0.81	+1.8
9,694	-		PGA1_c00080	0.86	+1.8
9,713	+		PGA1_c00080	0.88	-1.9
9,751	+				-1.8
9,817	+				+0.9
9,818	+				+1.5
9,825	-				-0.8
9,843	+				+0.6
9,849	-				-0.9
9,916	+				-0.0
9,924	+				+1.7
9,999	-				+0.5
10,028	+				-1.6
10,047	+				-1.4
10,047	+				+0.9
10,055	-				+1.8
10,055	-				+1.6
10,055	-				+2.0
10,079	-		PGA1_c00090	0.11	-1.6
10,114	+		PGA1_c00090	0.14	+1.4
10,127	-		PGA1_c00090	0.15	+1.3
10,179	+		PGA1_c00090	0.20	+0.8
10,184	+		PGA1_c00090	0.20	-0.4
10,187	-		PGA1_c00090	0.21	+2.3
10,189	+		PGA1_c00090	0.21	-2.2
10,281	-		PGA1_c00090	0.29	-0.3
10,293	-		PGA1_c00090	0.30	+1.4
10,293	-		PGA1_c00090	0.30	+1.1
10,336	-		PGA1_c00090	0.34	+0.6
10,343	+		PGA1_c00090	0.35	-0.3
10,351	-		PGA1_c00090	0.36	+0.3
10,351	-		PGA1_c00090	0.36	-2.6
10,359	-		PGA1_c00090	0.36	-0.2
10,421	+		PGA1_c00090	0.42	+0.2
10,433	+		PGA1_c00090	0.43	-0.9
10,434	-		PGA1_c00090	0.43	+0.7
10,443	+		PGA1_c00090	0.44	-0.1
10,445	+		PGA1_c00090	0.44	+0.1
10,614	+		PGA1_c00090	0.60	+1.4
10,622	+		PGA1_c00090	0.61	+1.9
10,622	-		PGA1_c00090	0.61	+1.1
10,622	-		PGA1_c00090	0.61	-2.8
10,703	+		PGA1_c00090	0.68	-0.6
10,703	+		PGA1_c00090	0.68	-1.0
10,704	+		PGA1_c00090	0.68	-0.4
10,719	+		PGA1_c00090	0.70	-2.8
10,740	+		PGA1_c00090	0.72	-2.9
10,740	+		PGA1_c00090	0.72	-0.9
10,740	+		PGA1_c00090	0.72	-1.2
10,740	+		PGA1_c00090	0.72	+1.3
10,748	-		PGA1_c00090	0.72	+2.0
10,798	-		PGA1_c00090	0.77	-2.2