Experiment: m.b. 1-ethyl-3-methylimidazolium lysine 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_728 and HP15_729 are separated by 54 nucleotides HP15_729 and HP15_730 are separated by 82 nucleotides HP15_730 and HP15_731 are separated by 137 nucleotides
HP15_728: HP15_728 - PhoH family protein, at 738,805 to 740,160
_728
HP15_729: HP15_729 - signal transduction protein with CBS domains, at 740,215 to 740,706
_729
HP15_730: HP15_730 - protein containing StAR-related lipid-transfer (START) domain, at 740,789 to 741,523
_730
HP15_731: HP15_731 - conserved hypothetical protein, at 741,661 to 742,668
_731
Position (kb) 740
741
742 Strain fitness (log2 ratio) -2
-1
0
1 at 739.818 kb on - strand, within HP15_728 at 739.902 kb on - strand, within HP15_728 at 739.920 kb on - strand, within HP15_728 at 739.973 kb on - strand, within HP15_728 at 740.170 kb on + strand at 740.188 kb on - strand at 740.188 kb on - strand at 740.228 kb on + strand at 740.484 kb on + strand, within HP15_729 at 740.500 kb on - strand, within HP15_729 at 740.517 kb on + strand, within HP15_729 at 740.721 kb on - strand at 740.769 kb on + strand at 740.769 kb on + strand at 740.769 kb on + strand at 740.775 kb on - strand at 740.887 kb on - strand, within HP15_730 at 740.922 kb on + strand, within HP15_730 at 740.951 kb on + strand, within HP15_730 at 740.977 kb on - strand, within HP15_730 at 741.008 kb on - strand, within HP15_730 at 741.090 kb on - strand, within HP15_730 at 741.097 kb on + strand, within HP15_730 at 741.241 kb on - strand, within HP15_730 at 741.323 kb on - strand, within HP15_730 at 741.323 kb on - strand, within HP15_730 at 741.459 kb on + strand at 741.472 kb on - strand at 741.513 kb on - strand at 741.546 kb on - strand at 741.691 kb on + strand at 741.754 kb on - strand at 741.787 kb on - strand, within HP15_731 at 741.909 kb on + strand, within HP15_731 at 742.009 kb on - strand, within HP15_731 at 742.019 kb on - strand, within HP15_731 at 742.071 kb on + strand, within HP15_731 at 742.190 kb on + strand, within HP15_731 at 742.203 kb on - strand, within HP15_731 at 742.236 kb on + strand, within HP15_731 at 742.285 kb on + strand, within HP15_731 at 742.331 kb on - strand, within HP15_731 at 742.336 kb on + strand, within HP15_731 at 742.443 kb on + strand, within HP15_731
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 1-ethyl-3-methylimidazolium lysine 5 mM remove 739,818 - HP15_728 0.75 +0.3 739,902 - HP15_728 0.81 -0.5 739,920 - HP15_728 0.82 -1.5 739,973 - HP15_728 0.86 +0.4 740,170 + -0.0 740,188 - -2.1 740,188 - +0.4 740,228 + +0.9 740,484 + HP15_729 0.55 +0.2 740,500 - HP15_729 0.58 +0.1 740,517 + HP15_729 0.61 -0.2 740,721 - +0.0 740,769 + +0.4 740,769 + -0.1 740,769 + -0.2 740,775 - -0.3 740,887 - HP15_730 0.13 +0.3 740,922 + HP15_730 0.18 -0.1 740,951 + HP15_730 0.22 -0.3 740,977 - HP15_730 0.26 -1.2 741,008 - HP15_730 0.30 -0.7 741,090 - HP15_730 0.41 -0.2 741,097 + HP15_730 0.42 -0.5 741,241 - HP15_730 0.61 +0.6 741,323 - HP15_730 0.73 -1.2 741,323 - HP15_730 0.73 -0.2 741,459 + +0.3 741,472 - +0.0 741,513 - +0.1 741,546 - -0.5 741,691 + +0.2 741,754 - +0.4 741,787 - HP15_731 0.12 -0.8 741,909 + HP15_731 0.25 +0.2 742,009 - HP15_731 0.35 -0.1 742,019 - HP15_731 0.36 +0.1 742,071 + HP15_731 0.41 -0.3 742,190 + HP15_731 0.52 -0.8 742,203 - HP15_731 0.54 -0.0 742,236 + HP15_731 0.57 +0.5 742,285 + HP15_731 0.62 +0.2 742,331 - HP15_731 0.66 +0.0 742,336 + HP15_731 0.67 -0.5 742,443 + HP15_731 0.78 +0.8
Or see this region's nucleotide sequence