Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c07230

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
742,424	+		PGA1_c07210	0.83	-2.6
742,427	-		PGA1_c07210	0.83	-0.9
742,477	+		PGA1_c07210	0.89	+0.9
742,540	+				-1.0
742,620	-				+0.7
742,663	+				+1.8
742,663	+				+0.3
742,671	-		PGA1_c07220	0.10	-0.4
742,738	-		PGA1_c07220	0.18	+0.1
742,790	-		PGA1_c07220	0.25	-0.6
742,842	-		PGA1_c07220	0.31	+2.3
742,892	-		PGA1_c07220	0.37	+0.8
743,023	+		PGA1_c07220	0.52	+0.4
743,079	+		PGA1_c07220	0.59	-0.4
743,109	+		PGA1_c07220	0.63	-0.9
743,127	-		PGA1_c07220	0.65	+1.1
743,133	-		PGA1_c07220	0.65	+1.3
743,156	+		PGA1_c07220	0.68	+0.4
743,156	+		PGA1_c07220	0.68	-0.4
743,156	+		PGA1_c07220	0.68	+0.2
743,156	+		PGA1_c07220	0.68	+1.3
743,156	+		PGA1_c07220	0.68	-2.3
743,164	-		PGA1_c07220	0.69	+0.6
743,164	-		PGA1_c07220	0.69	+1.1
743,164	-		PGA1_c07220	0.69	+0.6
743,181	+		PGA1_c07220	0.71	-1.8
743,192	+		PGA1_c07220	0.72	-1.5
743,262	+		PGA1_c07220	0.81	+1.2
743,267	+		PGA1_c07220	0.81	-0.5
743,270	-		PGA1_c07220	0.82	-0.3
743,271	+		PGA1_c07220	0.82	+0.3
743,340	-				-1.5
743,373	+				-1.1
743,467	-				+0.4
743,511	+		PGA1_c07230	0.11	-2.4
743,512	+		PGA1_c07230	0.11	+0.2
743,519	-		PGA1_c07230	0.12	-1.7
743,564	+		PGA1_c07230	0.17	-1.5
743,572	-		PGA1_c07230	0.18	-2.7
743,572	-		PGA1_c07230	0.18	+1.5
743,614	-		PGA1_c07230	0.23	-0.4
743,630	+		PGA1_c07230	0.25	-1.3
743,630	+		PGA1_c07230	0.25	-1.0
743,666	-		PGA1_c07230	0.29	-0.6
743,780	+		PGA1_c07230	0.42	-1.2
743,795	+		PGA1_c07230	0.44	+0.2
743,805	+		PGA1_c07230	0.45	-0.5
743,876	+		PGA1_c07230	0.53	-0.8
743,884	-		PGA1_c07230	0.54	+0.2
743,884	-		PGA1_c07230	0.54	-0.5
743,886	+		PGA1_c07230	0.54	-2.4
743,894	-		PGA1_c07230	0.55	-2.2
743,904	-		PGA1_c07230	0.57	-2.5
743,904	-		PGA1_c07230	0.57	-1.8
743,904	-		PGA1_c07230	0.57	-1.2
743,904	-		PGA1_c07230	0.57	-1.3
743,904	-		PGA1_c07230	0.57	-0.9
743,936	-		PGA1_c07230	0.60	+0.8
744,035	+		PGA1_c07230	0.72	-2.4
744,078	+		PGA1_c07230	0.77	+0.6
744,083	+		PGA1_c07230	0.77	-2.7
744,088	+		PGA1_c07230	0.78	-0.3
744,096	-		PGA1_c07230	0.79	-2.4
744,134	+		PGA1_c07230	0.83	-3.2
744,139	+		PGA1_c07230	0.84	-1.0
744,162	+		PGA1_c07230	0.87	-1.1
744,170	-		PGA1_c07230	0.88	+0.8
744,177	-		PGA1_c07230	0.88	-1.9
744,184	-		PGA1_c07230	0.89	-1.1
744,186	+		PGA1_c07230	0.89	-1.7
744,194	-				+0.7
744,310	-				-0.1
744,352	+				-0.9
744,376	-				-1.4
744,442	-		PGA1_c07240	0.15	-1.1
744,571	+		PGA1_c07240	0.28	+0.2
744,627	-		PGA1_c07240	0.34	-3.4
744,723	-		PGA1_c07240	0.44	-2.1
744,733	+		PGA1_c07240	0.45	-0.1
744,733	+		PGA1_c07240	0.45	-0.7
744,740	+		PGA1_c07240	0.45	-1.1
744,741	-		PGA1_c07240	0.46	+0.5
744,789	+		PGA1_c07240	0.50	-0.2
744,792	-		PGA1_c07240	0.51	-1.5
744,792	-		PGA1_c07240	0.51	+2.9
744,827	+		PGA1_c07240	0.54	-1.4
744,853	-		PGA1_c07240	0.57	-2.4
744,862	+		PGA1_c07240	0.58	-2.1
744,870	-		PGA1_c07240	0.59	-1.7
744,889	-		PGA1_c07240	0.60	-0.9
744,944	-		PGA1_c07240	0.66	+1.1
744,969	+		PGA1_c07240	0.68	+0.4
745,017	+		PGA1_c07240	0.73	-1.8
745,049	-		PGA1_c07240	0.77	-0.8
745,049	-		PGA1_c07240	0.77	-0.4
745,051	+		PGA1_c07240	0.77	-1.7
745,079	+		PGA1_c07240	0.80	+0.9
745,089	+		PGA1_c07240	0.81	-2.7
745,206	+				+0.0
745,206	+				-2.9
745,206	+				-2.7
745,214	-				-1.3
745,251	+				-3.1
745,251	+				+1.6
745,251	+				+0.5
745,251	+				-2.5
745,251	+				-0.8
745,259	-				-2.2
745,259	-				-0.2
745,259	-				-0.8