Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34290

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
3,592,755	-		PGA1_c34270	0.55	+1.2
3,592,762	+		PGA1_c34270	0.55	+1.8
3,592,762	+		PGA1_c34270	0.55	-0.5
3,592,762	+		PGA1_c34270	0.55	+0.3
3,592,762	+		PGA1_c34270	0.55	+0.5
3,592,762	+		PGA1_c34270	0.55	-0.9
3,592,770	-		PGA1_c34270	0.56	+1.2
3,592,770	-		PGA1_c34270	0.56	+1.9
3,592,820	-		PGA1_c34270	0.62	-1.8
3,592,820	-		PGA1_c34270	0.62	-2.5
3,592,821	+		PGA1_c34270	0.62	-1.2
3,592,839	-		PGA1_c34270	0.64	-0.7
3,592,935	-		PGA1_c34270	0.75	+0.5
3,593,033	+		PGA1_c34270	0.86	-3.9
3,593,041	-		PGA1_c34270	0.87	+1.6
3,593,128	+				+0.2
3,593,138	+				+0.4
3,593,141	-				+1.4
3,593,196	-				-0.7
3,593,217	-				+0.1
3,593,228	-				-2.6
3,593,248	-				+0.4
3,593,263	-				-0.6
3,593,279	+				-1.9
3,593,287	-				+0.5
3,593,307	-				-0.9
3,593,307	-				+0.8
3,593,340	-		PGA1_c34280	0.16	-0.1
3,593,425	+		PGA1_c34280	0.35	-2.7
3,593,478	-		PGA1_c34280	0.46	-2.0
3,593,479	-		PGA1_c34280	0.47	+0.1
3,593,524	-		PGA1_c34280	0.57	-1.1
3,593,545	-		PGA1_c34280	0.61	+1.5
3,593,552	-		PGA1_c34280	0.63	-0.7
3,593,569	+		PGA1_c34280	0.67	-1.1
3,593,602	-		PGA1_c34280	0.74	+0.9
3,593,624	-		PGA1_c34280	0.79	+1.7
3,593,706	+				-1.6
3,593,725	+				-0.7
3,593,736	+				-0.1
3,593,969	+		PGA1_c34290	0.49	-0.7
3,594,044	-		PGA1_c34290	0.63	-0.6
3,594,070	-		PGA1_c34290	0.68	-0.2
3,594,161	+		PGA1_c34290	0.85	-1.5
3,594,175	-		PGA1_c34290	0.88	+0.2
3,594,217	+				+1.0
3,594,219	-				+0.2
3,594,310	+				-0.7
3,594,318	-				+1.0
3,594,321	-				+0.8
3,594,336	-				-1.4
3,594,336	-				-0.5
3,594,336	-				+0.1
3,594,360	+				+2.0
3,594,405	+				+0.7
3,594,434	+				+0.6
3,594,442	+				-0.6
3,594,450	-				-0.5
3,594,483	-				-0.0
3,594,483	-				-0.5
3,594,510	+				-1.4
3,594,510	+				+1.6
3,594,510	+				+0.3
3,594,518	-				-1.1
3,594,518	-				-0.1
3,594,518	-				+0.9
3,594,581	-		PGA1_c34300	0.13	-0.6
3,594,621	+		PGA1_c34300	0.14	-3.0
3,594,621	+		PGA1_c34300	0.14	+0.5
3,594,650	+		PGA1_c34300	0.16	+0.1
3,594,672	-		PGA1_c34300	0.17	-1.1
3,594,698	-		PGA1_c34300	0.18	-1.2
3,594,731	+		PGA1_c34300	0.20	-1.0
3,594,732	-		PGA1_c34300	0.20	+1.8
3,594,739	-		PGA1_c34300	0.20	-1.5
3,594,765	-		PGA1_c34300	0.22	-0.9
3,594,787	-		PGA1_c34300	0.23	+0.7
3,594,809	-		PGA1_c34300	0.24	+0.4
3,594,852	-		PGA1_c34300	0.26	-1.4
3,594,888	+		PGA1_c34300	0.28	+0.2
3,595,029	+		PGA1_c34300	0.35	-0.1
3,595,059	+		PGA1_c34300	0.36	+0.2
3,595,102	+		PGA1_c34300	0.38	-2.6
3,595,152	-		PGA1_c34300	0.41	-0.6