Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28930

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
3,033,513	-		PGA1_c28920	0.29	-0.8
3,033,513	-		PGA1_c28920	0.29	+1.7
3,033,538	+		PGA1_c28920	0.31	+1.6
3,033,561	+		PGA1_c28920	0.34	+1.8
3,033,569	+		PGA1_c28920	0.35	+0.6
3,033,690	+		PGA1_c28920	0.49	+0.4
3,033,695	+		PGA1_c28920	0.49	+1.3
3,033,732	+		PGA1_c28920	0.53	-1.0
3,033,768	+		PGA1_c28920	0.57	+1.2
3,033,768	+		PGA1_c28920	0.57	+2.2
3,033,776	-		PGA1_c28920	0.58	+0.3
3,033,776	-		PGA1_c28920	0.58	-1.2
3,033,995	+		PGA1_c28920	0.83	-1.2
3,033,995	+		PGA1_c28920	0.83	-2.1
3,034,046	+		PGA1_c28920	0.89	-0.3
3,034,105	-				+1.5
3,034,131	+				-0.0
3,034,131	+				+1.6
3,034,177	+				-1.4
3,034,185	-				+1.8
3,034,195	+				+0.6
3,034,208	-				-0.8
3,034,237	+				+1.6
3,034,245	-				+0.3
3,034,361	-				+0.7
3,034,387	+				-0.8
3,034,387	+				+2.1
3,034,395	-				+0.6
3,034,395	-				-1.5
3,034,395	-				-2.1
3,034,395	-				+2.2
3,034,420	+				-0.4
3,034,420	+				+1.0
3,034,497	+				+0.9
3,034,497	-				-0.3
3,034,505	-				-0.8
3,034,509	+				+0.4
3,035,564	+				+0.9
3,035,569	+				-1.9
3,035,572	-				+0.2
3,035,588	+				-0.7
3,035,588	+				-0.8
3,035,602	-				-1.2
3,035,676	+				+1.6
3,035,873	+		PGA1_c28940	0.18	-1.4
3,035,896	+		PGA1_c28940	0.19	-1.8
3,035,896	+		PGA1_c28940	0.19	-1.2
3,035,922	+		PGA1_c28940	0.20	-0.4
3,035,925	+		PGA1_c28940	0.20	-0.4
3,035,941	+		PGA1_c28940	0.21	-0.4
3,035,943	-		PGA1_c28940	0.21	-1.2
3,035,944	-		PGA1_c28940	0.21	-1.0
3,036,024	-		PGA1_c28940	0.25	-0.6
3,036,043	+		PGA1_c28940	0.26	-1.8
3,036,088	+		PGA1_c28940	0.29	-0.8
3,036,113	+		PGA1_c28940	0.30	+0.2
3,036,118	+		PGA1_c28940	0.30	-1.8
3,036,375	+		PGA1_c28940	0.43	-2.4
3,036,375	+		PGA1_c28940	0.43	-2.2