Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28920

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
3,032,288	+		PGA1_c28900	0.60	-1.7
3,032,296	-		PGA1_c28900	0.61	+1.9
3,032,325	+		PGA1_c28900	0.64	-1.4
3,032,325	+		PGA1_c28900	0.64	+1.4
3,032,325	+		PGA1_c28900	0.64	-0.8
3,032,325	+		PGA1_c28900	0.64	-0.0
3,032,325	+		PGA1_c28900	0.64	-1.9
3,032,325	+		PGA1_c28900	0.64	+1.1
3,032,333	-		PGA1_c28900	0.65	+1.0
3,032,400	-		PGA1_c28900	0.72	+0.4
3,032,463	+		PGA1_c28900	0.79	+1.6
3,032,469	+		PGA1_c28900	0.80	-1.2
3,032,476	+		PGA1_c28900	0.81	+0.6
3,032,477	-		PGA1_c28900	0.81	+1.2
3,032,486	+		PGA1_c28900	0.82	+2.9
3,032,487	+		PGA1_c28900	0.82	+0.3
3,032,489	-		PGA1_c28900	0.82	+0.8
3,032,494	-		PGA1_c28900	0.83	-0.7
3,032,564	-				+1.2
3,032,564	-				-1.5
3,032,564	-				-0.3
3,032,566	-				+0.6
3,032,606	+				-1.2
3,032,606	+				-1.0
3,032,614	-				+0.9
3,032,627	+				+0.2
3,032,627	+				+1.5
3,032,627	+				-1.1
3,032,635	-				+2.3
3,032,647	-				-0.0
3,032,649	+				+0.7
3,032,681	-				-0.8
3,032,735	-				+0.8
3,032,761	-				-1.7
3,032,784	+				+1.4
3,032,830	+				+1.2
3,032,835	+				+0.2
3,032,889	-		PGA1_c28910	0.20	+0.2
3,032,958	-		PGA1_c28910	0.35	-1.0
3,032,960	+		PGA1_c28910	0.35	-0.9
3,032,960	+		PGA1_c28910	0.35	+2.4
3,032,960	+		PGA1_c28910	0.35	-0.4
3,032,960	+		PGA1_c28910	0.35	-1.8
3,032,962	+		PGA1_c28910	0.36	-0.3
3,032,968	-		PGA1_c28910	0.37	+0.8
3,032,968	-		PGA1_c28910	0.37	-1.8
3,032,968	-		PGA1_c28910	0.37	+1.0
3,032,970	-		PGA1_c28910	0.37	+0.2
3,032,975	+		PGA1_c28910	0.38	-0.3
3,033,041	-		PGA1_c28910	0.52	-0.0
3,033,073	+		PGA1_c28910	0.59	+0.2
3,033,073	+		PGA1_c28910	0.59	-2.9
3,033,132	+		PGA1_c28910	0.72	+0.9
3,033,134	+		PGA1_c28910	0.72	-0.0
3,033,176	-		PGA1_c28910	0.81	-0.6
3,033,196	-		PGA1_c28910	0.85	-1.2
3,033,227	-				-0.4
3,033,237	+				-2.7
3,033,237	-				-0.4
3,033,249	+				-0.0
3,033,249	+				-0.8
3,033,257	-				-2.8
3,033,257	-				+0.3
3,033,267	+				-0.4
3,033,270	-				+1.6
3,033,280	-				-0.0
3,033,458	+		PGA1_c28920	0.22	-0.9
3,033,458	+		PGA1_c28920	0.22	+1.3
3,033,507	-		PGA1_c28920	0.28	+1.6
3,033,513	-		PGA1_c28920	0.29	-0.8
3,033,513	-		PGA1_c28920	0.29	+1.7
3,033,538	+		PGA1_c28920	0.31	+1.6
3,033,561	+		PGA1_c28920	0.34	+1.8
3,033,569	+		PGA1_c28920	0.35	+0.6
3,033,690	+		PGA1_c28920	0.49	+0.4
3,033,695	+		PGA1_c28920	0.49	+1.3
3,033,732	+		PGA1_c28920	0.53	-1.0
3,033,768	+		PGA1_c28920	0.57	+1.2
3,033,768	+		PGA1_c28920	0.57	+2.2
3,033,776	-		PGA1_c28920	0.58	+0.3
3,033,776	-		PGA1_c28920	0.58	-1.2
3,033,995	+		PGA1_c28920	0.83	-1.2
3,033,995	+		PGA1_c28920	0.83	-2.1
3,034,046	+		PGA1_c28920	0.89	-0.3
3,034,105	-				+1.5
3,034,131	+				-0.0
3,034,131	+				+1.6
3,034,177	+				-1.4
3,034,185	-				+1.8
3,034,195	+				+0.6
3,034,208	-				-0.8
3,034,237	+				+1.6
3,034,245	-				+0.3
3,034,361	-				+0.7
3,034,387	+				-0.8
3,034,387	+				+2.1
3,034,395	-				+0.6
3,034,395	-				-1.5
3,034,395	-				-2.1
3,034,395	-				+2.2
3,034,420	+				-0.4
3,034,420	+				+1.0
3,034,497	+				+0.9
3,034,497	-				-0.3
3,034,505	-				-0.8
3,034,509	+				+0.4