Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28350

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
2,966,254	-				+1.3
2,966,366	+				+1.5
2,966,382	-				-0.3
2,966,382	-				-1.3
2,966,437	+		PGA1_c28350	0.13	-0.4
2,966,437	+		PGA1_c28350	0.13	+0.2
2,966,445	-		PGA1_c28350	0.14	+1.8
2,966,445	-		PGA1_c28350	0.14	+1.6
2,966,445	-		PGA1_c28350	0.14	-0.8
2,966,445	-		PGA1_c28350	0.14	-0.3
2,966,445	-		PGA1_c28350	0.14	-1.1
2,966,512	+		PGA1_c28350	0.24	+1.5
2,966,549	+		PGA1_c28350	0.29	-0.1
2,966,557	-		PGA1_c28350	0.30	-1.5
2,966,603	+		PGA1_c28350	0.37	-0.5
2,966,623	+		PGA1_c28350	0.40	-1.6
2,966,629	-		PGA1_c28350	0.40	+2.5
2,966,690	+		PGA1_c28350	0.49	+0.1
2,966,699	-		PGA1_c28350	0.51	+0.7
2,966,700	-		PGA1_c28350	0.51	+1.3
2,966,767	+		PGA1_c28350	0.60	+1.7
2,966,774	-		PGA1_c28350	0.61	+1.7
2,966,804	+		PGA1_c28350	0.66	-0.3
2,966,854	+		PGA1_c28350	0.73	+0.7
2,966,854	+		PGA1_c28350	0.73	+0.2
2,966,885	-		PGA1_c28350	0.77	-2.6
2,966,902	-		PGA1_c28350	0.80	-0.3
2,967,050	+				+0.9
2,967,068	+				-1.6
2,967,112	-				+1.2
2,967,192	+		PGA1_c28360	0.15	-2.2
2,967,268	-		PGA1_c28360	0.22	-2.0
2,967,291	+		PGA1_c28360	0.24	+2.2
2,967,309	-		PGA1_c28360	0.26	+0.7
2,967,309	-		PGA1_c28360	0.26	+0.1
2,967,349	+		PGA1_c28360	0.30	-0.8
2,967,435	+		PGA1_c28360	0.38	-0.2
2,967,463	+		PGA1_c28360	0.41	-2.3
2,967,499	-		PGA1_c28360	0.44	-0.9
2,967,554	+		PGA1_c28360	0.50	+0.7
2,967,587	+		PGA1_c28360	0.53	+2.4
2,967,592	+		PGA1_c28360	0.53	+0.7
2,967,595	-		PGA1_c28360	0.54	+0.5
2,967,606	-		PGA1_c28360	0.55	-2.0
2,967,621	-		PGA1_c28360	0.56	+0.2
2,967,738	+		PGA1_c28360	0.67	+0.8
2,967,750	+		PGA1_c28360	0.69	-0.5
2,967,754	+		PGA1_c28360	0.69	+1.2
2,967,763	-		PGA1_c28360	0.70	-1.1
2,967,822	+		PGA1_c28360	0.75	-0.3
2,967,856	+		PGA1_c28360	0.79	+2.6
2,967,865	+		PGA1_c28360	0.80	-2.6
2,967,891	-		PGA1_c28360	0.82	-0.5
2,967,914	+		PGA1_c28360	0.84	+0.1
2,967,920	-		PGA1_c28360	0.85	-3.1
2,967,922	-		PGA1_c28360	0.85	+1.7
2,967,922	-		PGA1_c28360	0.85	-0.8
2,967,981	-				-0.4
2,967,987	+				-0.5