Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27950

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
2,912,327	-				-0.1
2,912,344	-				-1.0
2,912,364	+				+0.2
2,912,369	+				-0.6
2,912,369	+				+0.5
2,912,374	+				+0.7
2,912,374	+				+0.9
2,912,374	+				+1.1
2,912,374	+				+0.7
2,912,374	+				-1.1
2,912,377	-				-1.8
2,912,377	-				+0.7
2,912,377	-				-0.2
2,912,377	-				-2.0
2,912,382	-				-0.8
2,912,382	-				-2.4
2,912,404	+		PGA1_c27940	0.11	-0.3
2,912,404	+		PGA1_c27940	0.11	+0.7
2,912,404	+		PGA1_c27940	0.11	+0.1
2,912,412	-		PGA1_c27940	0.11	+0.3
2,912,412	-		PGA1_c27940	0.11	-1.0
2,912,412	-		PGA1_c27940	0.11	-0.3
2,912,412	-		PGA1_c27940	0.11	+1.2
2,912,412	-		PGA1_c27940	0.11	-2.3
2,912,412	-		PGA1_c27940	0.11	-1.4
2,912,494	+		PGA1_c27940	0.20	+0.5
2,912,512	+		PGA1_c27940	0.22	-1.2
2,912,512	+		PGA1_c27940	0.22	-1.1
2,912,512	+		PGA1_c27940	0.22	-1.8
2,912,512	+		PGA1_c27940	0.22	-0.5
2,912,512	+		PGA1_c27940	0.22	+1.4
2,912,512	+		PGA1_c27940	0.22	-2.4
2,912,512	+		PGA1_c27940	0.22	+0.1
2,912,512	+		PGA1_c27940	0.22	+1.2
2,912,520	-		PGA1_c27940	0.23	+0.3
2,912,520	-		PGA1_c27940	0.23	-1.4
2,912,572	-		PGA1_c27940	0.29	+0.8
2,912,576	+		PGA1_c27940	0.29	+1.0
2,912,597	+		PGA1_c27940	0.31	-0.0
2,912,670	-		PGA1_c27940	0.39	+2.3
2,912,724	+		PGA1_c27940	0.45	-0.1
2,912,732	-		PGA1_c27940	0.46	-3.0
2,912,732	-		PGA1_c27940	0.46	-2.0
2,912,776	+		PGA1_c27940	0.51	+0.7
2,912,802	+		PGA1_c27940	0.54	+0.7
2,912,859	-		PGA1_c27940	0.60	-0.3
2,913,009	-		PGA1_c27940	0.76	-1.1
2,913,009	-		PGA1_c27940	0.76	+1.4
2,913,019	+		PGA1_c27940	0.77	-1.6
2,913,019	+		PGA1_c27940	0.77	-1.5
2,913,027	-		PGA1_c27940	0.78	+3.4
2,913,027	-		PGA1_c27940	0.78	-0.7
2,913,027	-		PGA1_c27940	0.78	+0.0
2,913,208	-				+1.6
2,913,208	-				+0.8
2,913,226	+				+0.5
2,913,226	+				+0.8
2,913,234	-				+0.4
2,913,264	-				-0.4
2,913,264	-				-3.3
2,913,301	+				+0.4
2,913,301	+				-1.5
2,913,301	+				-1.5
2,913,309	-				-2.0
2,913,309	-				+1.2
2,913,347	-		PGA1_c27950	0.13	+0.0
2,913,381	+		PGA1_c27950	0.17	-1.1
2,913,381	+		PGA1_c27950	0.17	-0.1
2,913,389	-		PGA1_c27950	0.18	+2.4
2,913,392	+		PGA1_c27950	0.18	-0.1
2,913,520	-		PGA1_c27950	0.33	-1.2
2,913,529	+		PGA1_c27950	0.34	-2.3
2,913,628	+		PGA1_c27950	0.46	-0.9
2,913,635	+		PGA1_c27950	0.47	-1.4
2,913,672	+		PGA1_c27950	0.51	-2.0
2,913,686	-		PGA1_c27950	0.53	+0.8
2,913,691	-		PGA1_c27950	0.53	-0.6
2,913,696	-		PGA1_c27950	0.54	+0.2
2,913,722	-		PGA1_c27950	0.57	-1.4
2,913,794	-		PGA1_c27950	0.66	+0.4
2,913,802	+		PGA1_c27950	0.67	+0.3
2,913,808	+		PGA1_c27950	0.67	-1.6
2,913,834	+		PGA1_c27950	0.70	-1.7
2,913,842	-		PGA1_c27950	0.71	-1.3
2,913,898	+		PGA1_c27950	0.78	-3.1
2,913,912	+		PGA1_c27950	0.80	+0.0
2,913,959	+		PGA1_c27950	0.85	-1.1
2,913,969	+		PGA1_c27950	0.86	+1.1
2,913,976	+		PGA1_c27950	0.87	-0.9
2,914,063	+				-1.4
2,914,071	-				+1.5
2,914,071	-				+2.3
2,914,103	-				-1.4
2,914,107	+				+0.4
2,914,120	-				+0.6
2,914,137	-				-2.3
2,914,137	-				-0.3
2,914,137	-				-1.3
2,914,165	-				-3.0
2,914,259	-				+1.1
2,914,273	+				+0.3
2,914,398	+		PGA1_c27960	0.16	-0.8
2,914,401	-		PGA1_c27960	0.16	-0.7
2,914,406	-		PGA1_c27960	0.17	-2.7
2,914,406	-		PGA1_c27960	0.17	-2.3
2,914,447	+		PGA1_c27960	0.20	-0.4
2,914,447	+		PGA1_c27960	0.20	-1.1
2,914,447	+		PGA1_c27960	0.20	-1.4
2,914,455	-		PGA1_c27960	0.21	+0.5
2,914,574	+		PGA1_c27960	0.32	+0.0
2,914,582	-		PGA1_c27960	0.33	-1.7
2,914,637	+		PGA1_c27960	0.38	+0.7
2,914,694	+		PGA1_c27960	0.43	-0.6
2,914,702	-		PGA1_c27960	0.44	+0.1
2,914,702	-		PGA1_c27960	0.44	+0.4
2,914,702	-		PGA1_c27960	0.44	+0.7
2,914,707	+		PGA1_c27960	0.44	-2.6
2,914,743	+		PGA1_c27960	0.47	+2.1
2,914,807	-		PGA1_c27960	0.53	+1.3
2,914,844	+		PGA1_c27960	0.57	+1.9
2,914,890	+		PGA1_c27960	0.61	-2.1
2,914,898	-		PGA1_c27960	0.62	+0.7
2,914,901	+		PGA1_c27960	0.62	+1.0
2,914,969	-		PGA1_c27960	0.68	-1.1
2,915,023	-		PGA1_c27960	0.73	+1.2
2,915,028	-		PGA1_c27960	0.74	+0.2
2,915,028	-		PGA1_c27960	0.74	-0.6
2,915,067	-		PGA1_c27960	0.77	+1.1