Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c24620

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
2,568,926	+		PGA1_c24610	0.69	-0.6
2,568,934	+		PGA1_c24610	0.69	-1.1
2,568,934	-		PGA1_c24610	0.69	-0.9
2,568,934	-		PGA1_c24610	0.69	+1.5
2,568,983	+		PGA1_c24610	0.71	+0.6
2,569,008	+		PGA1_c24610	0.72	-0.9
2,569,035	+		PGA1_c24610	0.72	-0.6
2,569,035	+		PGA1_c24610	0.72	-0.7
2,569,037	+		PGA1_c24610	0.72	-0.3
2,569,043	-		PGA1_c24610	0.73	-0.2
2,569,054	-		PGA1_c24610	0.73	+0.7
2,569,120	+		PGA1_c24610	0.75	+0.4
2,569,204	+		PGA1_c24610	0.78	+1.1
2,569,251	-		PGA1_c24610	0.80	-0.9
2,569,257	+		PGA1_c24610	0.80	-1.2
2,569,281	+		PGA1_c24610	0.80	-0.3
2,569,294	-		PGA1_c24610	0.81	+0.3
2,569,428	+		PGA1_c24610	0.85	+0.9
2,569,428	+		PGA1_c24610	0.85	-1.7
2,569,430	-		PGA1_c24610	0.85	-0.4
2,569,502	-		PGA1_c24610	0.88	-1.9
2,569,552	-		PGA1_c24610	0.89	-0.1
2,569,557	-		PGA1_c24610	0.90	-3.2
2,569,557	-		PGA1_c24610	0.90	+0.3
2,569,558	+		PGA1_c24610	0.90	+0.9
2,569,574	+				-0.2
2,569,574	+				+0.2
2,569,574	+				-0.2
2,569,581	+				-0.8
2,569,618	+				-0.9
2,569,711	-				+0.8
2,569,729	-				+1.9
2,569,747	-				+1.0
2,569,753	-				-0.2
2,569,925	-				-2.2
2,569,941	+				+0.9
2,569,975	+				+0.8
2,569,975	+				-2.7
2,570,030	-		PGA1_c24620	0.14	-2.1
2,570,087	+		PGA1_c24620	0.19	-3.2
2,570,087	+		PGA1_c24620	0.19	-0.8
2,570,147	-		PGA1_c24620	0.25	-1.0
2,570,223	+		PGA1_c24620	0.32	-1.9
2,570,233	+		PGA1_c24620	0.33	-0.5
2,570,233	+		PGA1_c24620	0.33	-2.5
2,570,241	+		PGA1_c24620	0.34	+0.3
2,570,241	-		PGA1_c24620	0.34	+0.7
2,570,241	-		PGA1_c24620	0.34	-0.6
2,570,278	+		PGA1_c24620	0.38	-1.7
2,570,330	+		PGA1_c24620	0.43	-0.1
2,570,388	-		PGA1_c24620	0.48	-1.4
2,570,435	-		PGA1_c24620	0.53	-0.5
2,570,437	-		PGA1_c24620	0.53	-2.7
2,570,513	+		PGA1_c24620	0.60	-0.9
2,570,521	-		PGA1_c24620	0.61	+1.6
2,570,528	+		PGA1_c24620	0.61	+0.9
2,570,597	+		PGA1_c24620	0.68	+1.5
2,570,649	-		PGA1_c24620	0.73	-2.4
2,570,649	-		PGA1_c24620	0.73	-1.3
2,570,766	-		PGA1_c24620	0.84	-0.2
2,570,770	+		PGA1_c24620	0.85	-0.5
2,570,832	-				-0.3
2,570,832	-				+1.1
2,570,832	-				-2.0
2,570,844	+				-3.3
2,570,911	+				-3.1
2,570,930	+				+1.0
2,571,022	+		PGA1_c24630	0.18	+0.2
2,571,049	+		PGA1_c24630	0.23	-1.1
2,571,127	+		PGA1_c24630	0.39	+0.5
2,571,141	-		PGA1_c24630	0.42	+0.6
2,571,194	+		PGA1_c24630	0.52	-3.2
2,571,213	+		PGA1_c24630	0.56	-0.4
2,571,213	+		PGA1_c24630	0.56	+0.3
2,571,268	-		PGA1_c24630	0.67	-1.9
2,571,292	+		PGA1_c24630	0.72	+0.9
2,571,292	+		PGA1_c24630	0.72	-0.7
2,571,310	-		PGA1_c24630	0.76	+0.1
2,571,324	+		PGA1_c24630	0.79	-0.1
2,571,327	-		PGA1_c24630	0.79	+1.5
2,571,332	-		PGA1_c24630	0.80	-0.1
2,571,332	-		PGA1_c24630	0.80	+1.1
2,571,332	-		PGA1_c24630	0.80	-2.2
2,571,332	-		PGA1_c24630	0.80	-1.2
2,571,332	-				-0.1
2,571,369	-		PGA1_c24630	0.88	-1.3
2,571,369	-		PGA1_c24630	0.88	-0.0
2,571,379	-		PGA1_c24630	0.90	-1.3
2,571,379	-		PGA1_c24630	0.90	-2.6
2,571,482	-				-2.6
2,571,566	+				-0.6
2,571,571	+				+0.4
2,571,571	+				-3.1
2,571,571	+				+0.5
2,571,571	+				-1.6
2,571,571	+				+0.0
2,571,571	+				+2.1
2,571,571	+				-2.2
2,571,571	+				-1.5
2,571,579	-				-0.6
2,571,585	+				-2.4
2,571,639	-				+1.1
2,571,639	-				-0.1
2,571,717	-				+0.5
2,571,732	-				-0.9
2,571,739	+				-0.7
2,571,742	-				-0.8
2,571,746	-				+1.6
2,571,768	-		PGA1_c24640	0.11	-0.2
2,571,781	-		PGA1_c24640	0.12	-3.6
2,571,793	-		PGA1_c24640	0.14	+0.5
2,571,838	+		PGA1_c24640	0.18	+0.6
2,571,838	+		PGA1_c24640	0.18	+0.7
2,571,838	+		PGA1_c24640	0.18	-0.7
2,571,838	+		PGA1_c24640	0.18	-0.7
2,571,846	-		PGA1_c24640	0.18	+0.1
2,571,846	-		PGA1_c24640	0.18	-0.5
2,571,846	-		PGA1_c24640	0.18	-2.7
2,571,924	-		PGA1_c24640	0.25	-2.4
2,571,927	+		PGA1_c24640	0.25	+1.5