Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22250

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
2,310,949	-				+0.9
2,310,976	+				+0.4
2,310,984	-				-2.4
2,311,026	-				-2.8
2,311,054	-				-1.4
2,311,058	-				-3.6
2,311,077	+				+0.2
2,311,089	-				+1.2
2,311,120	-				+0.6
2,311,146	+				+0.9
2,311,146	+				-3.4
2,311,146	+				-1.8
2,311,183	+				-1.4
2,311,183	+				+0.3
2,311,190	+				-1.3
2,311,191	-				-2.3
2,311,248	+				-1.2
2,311,353	+				-1.0
2,311,365	-				+1.6
2,311,477	+				-1.0
2,311,477	+				-0.2
2,311,485	-				-0.1
2,311,485	-				-2.0
2,311,485	-				-1.4
2,311,485	-				-0.8
2,311,485	-				+0.5
2,311,485	-				+1.7
2,311,485	-				-1.8
2,311,485	-				+1.4
2,311,485	-				-2.0
2,311,485	-				+1.3
2,311,485	-				-2.6
2,311,485	-				+1.4
2,311,488	+				+1.2
2,311,494	+				-0.6
2,311,497	-				+0.0
2,311,502	-				+4.1
2,311,528	+				-0.0
2,311,582	+				-0.1
2,311,590	-				+0.4
2,311,590	-				-1.3
2,311,590	-				-0.3
2,311,657	-		PGA1_c22240	0.14	-0.8
2,311,695	-		PGA1_c22240	0.26	+1.2
2,311,749	+		PGA1_c22240	0.44	+0.8
2,311,777	-		PGA1_c22240	0.53	+1.0
2,311,836	-		PGA1_c22240	0.73	-0.5
2,311,838	-		PGA1_c22240	0.74	-1.4
2,312,082	+		PGA1_c22250	0.25	-0.7
2,312,082	+		PGA1_c22250	0.25	-3.2
2,312,118	+		PGA1_c22250	0.31	-2.0
2,312,149	+		PGA1_c22250	0.35	-3.8
2,312,153	+		PGA1_c22250	0.36	+0.4
2,312,287	+		PGA1_c22250	0.56	-1.0
2,312,311	+		PGA1_c22250	0.60	-2.3
2,312,327	+		PGA1_c22250	0.62	-2.8
2,312,400	-		PGA1_c22250	0.73	-2.2
2,312,405	-		PGA1_c22250	0.74	+0.4
2,312,438	-		PGA1_c22250	0.79	+0.6
2,312,462	+		PGA1_c22250	0.82	-1.2
2,312,540	-				-2.8
2,312,540	-				+0.6
2,312,540	-				-0.7
2,312,566	-				-0.2
2,312,629	+				+1.2
2,312,632	-				-0.2
2,312,637	-				+1.2
2,312,773	-				-2.2
2,312,778	-				+1.3
2,312,839	-		PGA1_c22260	0.19	+0.2
2,312,865	-		PGA1_c22260	0.25	-0.8
2,312,886	+		PGA1_c22260	0.31	-0.4
2,312,930	-		PGA1_c22260	0.43	+0.7
2,312,949	-		PGA1_c22260	0.48	+2.3
2,312,956	+		PGA1_c22260	0.49	+1.2
2,312,974	-		PGA1_c22260	0.54	-0.1
2,312,974	-		PGA1_c22260	0.54	+0.5
2,312,984	+		PGA1_c22260	0.57	+0.7
2,313,094	-		PGA1_c22260	0.86	+0.7
2,313,154	+				+0.3
2,313,223	+		PGA1_c22270	0.19	-0.6
2,313,258	+		PGA1_c22270	0.30	-2.5
2,313,258	+		PGA1_c22270	0.30	-0.2
2,313,261	-		PGA1_c22270	0.30	+0.5
2,313,263	+		PGA1_c22270	0.31	-1.6
2,313,291	+		PGA1_c22270	0.39	-2.2
2,313,291	+		PGA1_c22270	0.39	+0.7
2,313,418	+		PGA1_c22270	0.76	+1.3
2,313,418	+		PGA1_c22270	0.76	+0.1
2,313,421	-		PGA1_c22270	0.77	+0.6
2,313,450	+		PGA1_c22270	0.85	+1.9
2,313,464	-		PGA1_c22270	0.89	-0.3
2,313,486	+				-0.0
2,313,518	+				+0.2