Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21260

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
2,198,886	+		PGA1_c21250	0.23	-0.6
2,199,074	+		PGA1_c21250	0.39	+0.2
2,199,308	+		PGA1_c21250	0.58	+0.9
2,199,308	+		PGA1_c21250	0.58	-0.3
2,199,316	-		PGA1_c21250	0.59	-0.0
2,199,464	+		PGA1_c21250	0.71	-1.8
2,199,471	+		PGA1_c21250	0.72	-1.2
2,199,483	+		PGA1_c21250	0.73	-0.4
2,199,517	-		PGA1_c21250	0.76	+1.8
2,199,522	-		PGA1_c21250	0.76	+0.8
2,199,548	-		PGA1_c21250	0.78	+0.8
2,199,621	+		PGA1_c21250	0.84	-1.8
2,199,807	-				-2.6
2,199,807	-				+1.8
2,199,809	+				+1.2
2,199,817	-				+0.6
2,199,817	-				-3.1
2,199,817	-				+0.6
2,199,817	-				-2.1
2,199,842	-				+1.7
2,199,845	-				+0.4
2,199,996	-		PGA1_c21260	0.40	-1.9
2,200,052	+		PGA1_c21260	0.54	+1.6
2,200,084	+		PGA1_c21260	0.61	-1.6
2,200,107	+		PGA1_c21260	0.67	+0.3
2,200,120	-		PGA1_c21260	0.70	-2.5
2,200,168	+		PGA1_c21260	0.81	+2.1
2,200,175	+		PGA1_c21260	0.83	-0.7
2,200,185	+		PGA1_c21260	0.85	+3.2
2,200,241	+				+1.8
2,200,241	+				+1.7
2,200,309	+				+0.3
2,200,309	+				-0.3
2,200,317	-				-2.1
2,200,317	-				-0.2
2,200,328	-				-1.3
2,200,340	+				-0.4
2,200,377	-				+1.8
2,200,436	-				+0.4
2,200,436	-				+0.7
2,200,445	+				-0.8
2,200,445	+				+1.2
2,200,445	+				+0.7
2,200,445	+				+1.3
2,200,453	-				-0.7
2,200,453	-				+0.1
2,200,453	-				+0.4
2,200,468	+				-1.2
2,200,470	+				-0.8
2,200,478	-				+1.4
2,200,497	-				-0.2
2,200,534	+				-0.2
2,200,534	+				-0.9
2,200,534	+				-0.6
2,200,539	+				-0.9
2,200,542	-				+2.0
2,200,626	-		PGA1_c21270	0.15	+0.4
2,200,737	+		PGA1_c21270	0.28	-1.9
2,200,748	-		PGA1_c21270	0.29	+0.1
2,200,813	+		PGA1_c21270	0.36	+0.6
2,200,818	+		PGA1_c21270	0.37	+0.9
2,200,819	+		PGA1_c21270	0.37	-0.9
2,200,821	-		PGA1_c21270	0.37	-1.1
2,200,821	-		PGA1_c21270	0.37	+0.4
2,200,978	-		PGA1_c21270	0.55	+1.1
2,201,040	+		PGA1_c21270	0.63	+2.3
2,201,048	-		PGA1_c21270	0.63	+2.9
2,201,061	+		PGA1_c21270	0.65	-0.1
2,201,069	-		PGA1_c21270	0.66	-1.2
2,201,155	-		PGA1_c21270	0.76	+1.2
2,201,162	+		PGA1_c21270	0.77	+1.0
2,201,170	-		PGA1_c21270	0.78	+1.0
2,201,185	+		PGA1_c21270	0.79	-2.2
2,201,219	+		PGA1_c21270	0.83	+2.1
2,201,225	-		PGA1_c21270	0.84	-1.4
2,201,227	-		PGA1_c21270	0.84	-1.8
2,201,232	+		PGA1_c21270	0.85	+2.9