Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16400

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
1,700,076	+		PGA1_c16390	0.24	+0.9
1,700,084	+		PGA1_c16390	0.25	-1.9
1,700,084	-		PGA1_c16390	0.25	+0.8
1,700,110	-		PGA1_c16390	0.28	+0.9
1,700,436	-		PGA1_c16390	0.59	+0.3
1,700,486	+		PGA1_c16390	0.64	-2.4
1,700,498	+		PGA1_c16390	0.65	-0.9
1,700,747	+		PGA1_c16390	0.89	+0.8
1,700,836	+				+0.1
1,700,886	+				-0.2
1,700,980	+				+1.0
1,700,999	-				+1.4
1,701,001	+				-0.6
1,701,009	-		PGA1_c16400	0.11	-2.3
1,701,009	-		PGA1_c16400	0.11	-1.6
1,701,023	+		PGA1_c16400	0.13	-1.5
1,701,067	-		PGA1_c16400	0.21	+1.4
1,701,067	-		PGA1_c16400	0.21	-0.3
1,701,092	-		PGA1_c16400	0.25	-1.8
1,701,153	-		PGA1_c16400	0.36	-1.2
1,701,283	-		PGA1_c16400	0.59	-1.6
1,701,383	-		PGA1_c16400	0.77	-2.9
1,701,383	-		PGA1_c16400	0.77	+0.3
1,701,383	-		PGA1_c16400	0.77	+1.4
1,701,383	-		PGA1_c16400	0.77	+0.4
1,701,393	-		PGA1_c16400	0.78	-0.5
1,701,445	+		PGA1_c16400	0.88	-0.5
1,701,508	+				+2.7
1,701,516	-				+0.9
1,701,537	+				-1.2
1,701,545	-				-0.7
1,701,545	-				+1.4
1,701,545	-				+2.7
1,701,545	-				+1.0
1,701,592	+				+1.5
1,701,600	-				+2.4
1,701,701	-				+0.0
1,701,727	-				-0.2
1,701,778	-				-1.2
1,701,796	-				-0.4
1,701,801	+				-0.8
1,701,810	-				+0.0
1,701,865	+				+1.1
1,701,871	-				+1.0
1,702,029	+				+0.4
1,702,039	+				-0.4
1,702,068	-				-0.6
1,702,071	+				+1.3
1,702,143	+				-1.8
1,702,221	-		PGA1_c16410	0.15	+1.2
1,702,237	-		PGA1_c16410	0.17	-1.0
1,702,360	-		PGA1_c16410	0.35	+0.3
1,702,360	-		PGA1_c16410	0.35	-0.9
1,702,360	-		PGA1_c16410	0.35	+0.3
1,702,391	+		PGA1_c16410	0.39	-0.3
1,702,438	-		PGA1_c16410	0.46	-1.8
1,702,470	-		PGA1_c16410	0.51	-2.0
1,702,483	-		PGA1_c16410	0.53	-1.5
1,702,514	-		PGA1_c16410	0.57	+0.3