Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c15720

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
1,631,137	-		PGA1_c15710	0.27	+2.6
1,631,204	-		PGA1_c15710	0.33	+1.3
1,631,377	+		PGA1_c15710	0.47	-0.5
1,631,377	+		PGA1_c15710	0.47	-0.3
1,631,393	+		PGA1_c15710	0.48	-2.1
1,631,554	+		PGA1_c15710	0.61	+0.7
1,631,589	+		PGA1_c15710	0.64	-1.3
1,631,960	+				+1.5
1,631,985	+				-0.7
1,632,062	+				-0.7
1,632,063	+				-1.5
1,632,145	-				+1.4
1,632,242	-		PGA1_c15720	0.12	-2.1
1,632,289	+		PGA1_c15720	0.17	+0.5
1,632,347	-		PGA1_c15720	0.24	-1.5
1,632,402	+		PGA1_c15720	0.30	-1.9
1,632,422	+		PGA1_c15720	0.32	-0.9
1,632,422	+		PGA1_c15720	0.32	-3.3
1,632,446	+		PGA1_c15720	0.35	+0.5
1,632,461	+		PGA1_c15720	0.36	-1.2
1,632,525	-		PGA1_c15720	0.43	-0.8
1,632,535	-		PGA1_c15720	0.44	-2.1
1,632,550	+		PGA1_c15720	0.46	+0.3
1,632,607	+		PGA1_c15720	0.52	-1.2
1,632,680	-		PGA1_c15720	0.60	-3.4
1,632,705	-		PGA1_c15720	0.63	-1.1
1,632,726	+		PGA1_c15720	0.65	-0.9
1,632,783	+		PGA1_c15720	0.72	+0.6
1,632,844	-		PGA1_c15720	0.78	+0.2
1,632,914	-		PGA1_c15720	0.86	+2.0
1,632,935	-		PGA1_c15720	0.88	+0.5
1,632,964	+				-1.3
1,633,075	-				+2.9
1,633,145	+				+0.3
1,633,196	+		PGA1_c15730	0.13	-0.1
1,633,239	-		PGA1_c15730	0.20	+1.9
1,633,291	+		PGA1_c15730	0.27	-2.4
1,633,357	-		PGA1_c15730	0.37	+1.7
1,633,462	+		PGA1_c15730	0.52	+0.4
1,633,470	-		PGA1_c15730	0.53	-0.8
1,633,480	-		PGA1_c15730	0.54	+1.6
1,633,523	+		PGA1_c15730	0.61	+0.0
1,633,595	+		PGA1_c15730	0.71	-1.3
1,633,595	+		PGA1_c15730	0.71	+1.3
1,633,603	-		PGA1_c15730	0.72	+1.2
1,633,603	-		PGA1_c15730	0.72	-0.1
1,633,673	-		PGA1_c15730	0.82	-0.7
1,633,794	+				+0.6
1,633,802	-				-0.4
1,633,954	+		PGA1_c15740	0.22	-0.5