Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14630

Experiment: m.b. nitrite 8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 8 mM
1,517,794	-				-2.1
1,517,812	-				+2.7
1,517,868	-				-2.0
1,517,885	-				-1.0
1,517,975	+				-1.5
1,517,985	-				-0.8
1,518,005	+				-1.7
1,518,005	+				-2.5
1,518,005	+				-3.4
1,518,005	+				-2.5
1,518,005	+				-1.1
1,518,005	+				-2.6
1,518,005	+				-2.2
1,518,319	+		PGA1_c14630	0.25	-3.5
1,518,328	+		PGA1_c14630	0.25	-3.1
1,518,356	+		PGA1_c14630	0.27	-2.5
1,518,383	-		PGA1_c14630	0.29	-2.1
1,518,420	-		PGA1_c14630	0.31	-2.2
1,518,593	-		PGA1_c14630	0.42	-3.5
1,518,616	+		PGA1_c14630	0.44	+1.5
1,518,624	-		PGA1_c14630	0.44	-0.1
1,518,699	+		PGA1_c14630	0.49	-0.7
1,518,705	+		PGA1_c14630	0.49	-1.3
1,518,710	+		PGA1_c14630	0.50	-3.2
1,518,832	-		PGA1_c14630	0.58	-2.6
1,518,909	+		PGA1_c14630	0.63	-3.8
1,518,909	+		PGA1_c14630	0.63	-1.9
1,518,944	-		PGA1_c14630	0.65	-2.1
1,518,988	+		PGA1_c14630	0.68	-2.3
1,519,004	-		PGA1_c14630	0.69	-3.7
1,519,053	-		PGA1_c14630	0.72	-3.0
1,519,171	+		PGA1_c14630	0.79	-2.4
1,519,237	-		PGA1_c14630	0.84	-1.5
1,519,366	-				-2.1
1,519,403	-				-2.0
1,519,550	+				+0.2
1,519,622	+		PGA1_c14640	0.11	-0.7
1,519,764	+		PGA1_c14640	0.59	+1.2
1,519,849	-		PGA1_c14640	0.87	-1.2
1,519,849	-		PGA1_c14640	0.87	-0.1
1,519,873	+				-0.3
1,519,873	+				+2.5
1,519,888	+				-2.5
1,519,920	+				+0.7
1,519,920	+				-0.1
1,519,920	+				-1.5
1,519,928	-				-0.7
1,520,014	-				-1.4
1,520,014	-				-0.8
1,520,110	+				+0.6
1,520,110	+				-1.7
1,520,110	+				-1.2
1,520,110	+				-0.8
1,520,110	+				+1.1
1,520,110	+				+2.1
1,520,110	+				-0.4
1,520,110	+				-1.2
1,520,110	+				+0.6
1,520,110	+				-0.5
1,520,110	+				-0.4
1,520,110	+				-1.9
1,520,110	+				+0.1
1,520,110	+				-2.9
1,520,110	+				-0.8
1,520,110	+				+0.2
1,520,110	+				-0.0
1,520,110	+				+0.0
1,520,110	+				+0.3
1,520,110	+				+1.4
1,520,110	+				+0.6
1,520,110	+				-3.1
1,520,110	+				+2.0
1,520,110	+				+0.8
1,520,110	+				+1.3
1,520,118	-				+1.3
1,520,118	-				-1.4
1,520,118	-				+0.8
1,520,118	-				-0.0
1,520,118	-				+0.7
1,520,118	-				-2.6
1,520,118	-				+0.8
1,520,118	-				-2.8
1,520,118	-				+1.0
1,520,118	-				-0.8
1,520,118	-				-1.1
1,520,118	-				+0.4
1,520,118	-				-2.1
1,520,118	-				+0.7
1,520,118	-				-0.2
1,520,118	-				-0.1
1,520,118	-				+1.7
1,520,118	-				+2.0
1,520,118	-				-1.4
1,520,118	-				-0.4
1,520,118	-				+0.5
1,520,118	-				+0.8
1,520,141	+				-0.8
1,520,149	-				-3.6
1,520,192	-				+0.8
1,520,245	+		PGA1_c14650	0.11	-2.0
1,520,441	+		PGA1_c14650	0.29	+0.2
1,520,449	-		PGA1_c14650	0.30	-1.4
1,520,451	+		PGA1_c14650	0.30	+1.4
1,520,459	-		PGA1_c14650	0.31	-0.9
1,520,459	-		PGA1_c14650	0.31	+2.1
1,520,459	-		PGA1_c14650	0.31	+1.2
1,520,459	-		PGA1_c14650	0.31	+0.4
1,520,479	-		PGA1_c14650	0.33	+0.5