Strain Fitness in Shewanella amazonensis SB2B around Sama_3552

Experiment: Zinc 0.3125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Zinc 0.3125 mM
4,182,895	+		Sama_3550	0.70	+1.1
4,182,895	+		Sama_3550	0.70	-1.6
4,182,896	-		Sama_3550	0.70	+0.0
4,182,933	+		Sama_3550	0.75	-0.5
4,182,990	+		Sama_3550	0.81	+0.6
4,182,990	+		Sama_3550	0.81	+0.6
4,182,998	+		Sama_3550	0.82	+0.8
4,183,057	+		Sama_3550	0.89	-0.5
4,183,057	+		Sama_3550	0.89	-0.7
4,183,057	+		Sama_3550	0.89	+0.2
4,183,058	-		Sama_3550	0.89	-1.1
4,183,058	-		Sama_3550	0.89	+0.1
4,183,058	-		Sama_3550	0.89	+0.3
4,183,058	-		Sama_3550	0.89	+0.0
4,183,058	-		Sama_3550	0.89	-1.1
4,183,058	-		Sama_3550	0.89	+0.3
4,183,058	-		Sama_3550	0.89	+1.1
4,183,062	+		Sama_3550	0.90	+0.5
4,183,062	+		Sama_3550	0.90	+0.3
4,183,063	-		Sama_3550	0.90	-0.5
4,183,063	-		Sama_3550	0.90	-0.1
4,183,079	+				-0.9
4,183,080	-				-0.3
4,183,159	+				-1.4
4,183,160	-				-0.7
4,183,160	-				-0.4
4,183,160	-				+1.4
4,183,160	-				-1.4
4,183,160	-				+0.3
4,183,160	-				-0.3
4,183,160	-				+0.1
4,183,160	-				-0.6
4,183,219	+				-0.5
4,183,220	-				-1.2
4,183,220	-				-2.8
4,183,223	+				-1.5
4,183,223	+				-0.4
4,183,223	+				+0.3
4,183,224	-				+0.9
4,183,224	-				-1.1
4,183,224	-				+1.3
4,183,224	-				+0.6
4,183,310	+		Sama_3551	0.17	+0.3
4,183,311	-		Sama_3551	0.17	+1.1
4,183,311	-		Sama_3551	0.17	+0.2
4,183,311	-		Sama_3551	0.17	+0.1
4,183,311	-		Sama_3551	0.17	-0.4
4,183,350	+		Sama_3551	0.22	+0.6
4,183,350	+		Sama_3551	0.22	-0.3
4,183,351	-		Sama_3551	0.23	-0.1
4,183,351	-		Sama_3551	0.23	-0.9
4,183,377	+		Sama_3551	0.26	-1.1
4,183,377	+		Sama_3551	0.26	+1.2
4,183,377	+		Sama_3551	0.26	-1.7
4,183,377	+		Sama_3551	0.26	-0.0
4,183,377	+		Sama_3551	0.26	-0.2
4,183,377	+		Sama_3551	0.26	+1.2
4,183,377	+		Sama_3551	0.26	+0.6
4,183,377	+		Sama_3551	0.26	+0.2
4,183,378	-		Sama_3551	0.26	-1.1
4,183,378	-		Sama_3551	0.26	+0.1
4,183,378	-		Sama_3551	0.26	-0.6
4,183,378	-		Sama_3551	0.26	+1.0
4,183,378	-		Sama_3551	0.26	-0.8
4,183,378	-		Sama_3551	0.26	+0.1
4,183,378	-		Sama_3551	0.26	+0.1
4,183,380	+		Sama_3551	0.27	+0.4
4,183,380	+		Sama_3551	0.27	-1.4
4,183,380	+		Sama_3551	0.27	+0.2
4,183,380	+		Sama_3551	0.27	+0.6
4,183,380	+		Sama_3551	0.27	+1.1
4,183,380	+		Sama_3551	0.27	+0.0
4,183,380	+		Sama_3551	0.27	-1.2
4,183,380	+		Sama_3551	0.27	+0.0
4,183,380	+		Sama_3551	0.27	+0.4
4,183,380	+		Sama_3551	0.27	+0.8
4,183,380	+		Sama_3551	0.27	+0.1
4,183,380	+		Sama_3551	0.27	+0.7
4,183,380	+		Sama_3551	0.27	-0.6
4,183,380	+		Sama_3551	0.27	+0.9
4,183,380	+		Sama_3551	0.27	-0.2
4,183,381	-		Sama_3551	0.27	-0.4
4,183,381	-		Sama_3551	0.27	-0.3
4,183,381	-		Sama_3551	0.27	+0.8
4,183,381	-		Sama_3551	0.27	+0.3
4,183,381	-		Sama_3551	0.27	+0.4
4,183,381	-		Sama_3551	0.27	-2.2
4,183,381	-		Sama_3551	0.27	+0.2
4,183,381	-		Sama_3551	0.27	+0.1
4,183,381	-		Sama_3551	0.27	+0.3
4,183,381	-		Sama_3551	0.27	-1.1
4,183,381	-		Sama_3551	0.27	-0.7
4,183,381	-		Sama_3551	0.27	-0.5
4,183,381	-		Sama_3551	0.27	-1.1
4,183,381	-		Sama_3551	0.27	-1.7
4,183,400	+		Sama_3551	0.30	-0.9
4,183,401	-		Sama_3551	0.30	-1.1
4,183,401	-		Sama_3551	0.30	+1.2
4,183,401	-		Sama_3551	0.30	-0.5
4,183,521	-		Sama_3551	0.47	-1.6
4,183,521	-		Sama_3551	0.47	-1.1
4,183,539	+		Sama_3551	0.50	-0.5
4,183,539	+		Sama_3551	0.50	+0.8
4,183,540	-		Sama_3551	0.50	-0.3
4,183,577	+		Sama_3551	0.55	+0.4
4,183,577	+		Sama_3551	0.55	+0.3
4,183,577	+		Sama_3551	0.55	+1.6
4,183,577	+		Sama_3551	0.55	+0.3
4,183,578	-		Sama_3551	0.56	-0.2
4,183,578	-		Sama_3551	0.56	-0.3
4,183,578	-		Sama_3551	0.56	+1.3
4,183,578	-		Sama_3551	0.56	+0.5
4,183,578	-		Sama_3551	0.56	+0.0
4,183,579	+		Sama_3551	0.56	-1.6
4,183,580	-		Sama_3551	0.56	-1.5
4,183,657	+		Sama_3551	0.67	+0.1
4,183,657	+		Sama_3551	0.67	+0.6
4,183,657	+		Sama_3551	0.67	+0.2
4,183,657	+		Sama_3551	0.67	-0.9
4,183,658	-		Sama_3551	0.67	-1.2
4,183,658	-		Sama_3551	0.67	-1.1
4,183,667	+		Sama_3551	0.69	+0.8
4,183,667	+		Sama_3551	0.69	-0.0
4,183,668	-		Sama_3551	0.69	-0.4
4,183,668	-		Sama_3551	0.69	+1.0
4,183,668	-		Sama_3551	0.69	+0.9
4,183,668	-		Sama_3551	0.69	-0.0
4,183,668	-		Sama_3551	0.69	-0.6
4,183,668	-		Sama_3551	0.69	-0.4
4,183,668	-		Sama_3551	0.69	-0.3
4,183,724	+		Sama_3551	0.77	-0.2
4,183,724	+		Sama_3551	0.77	+0.5
4,183,724	+		Sama_3551	0.77	+0.8
4,183,724	+		Sama_3551	0.77	-0.3
4,183,724	+		Sama_3551	0.77	-0.6
4,183,725	-		Sama_3551	0.77	-0.3
4,183,725	-		Sama_3551	0.77	+0.2
4,183,725	-		Sama_3551	0.77	-0.6
4,183,725	-		Sama_3551	0.77	+0.8
4,183,725	-		Sama_3551	0.77	+0.6
4,183,725	-		Sama_3551	0.77	-0.9
4,183,725	-		Sama_3551	0.77	-0.2
4,183,725	-		Sama_3551	0.77	+1.6
4,183,849	+				+0.3
4,183,849	+				-0.1
4,183,850	-				-1.0
4,183,850	-				-0.5
4,183,850	-				+1.2
4,183,850	-				-0.4
4,183,880	+				-0.0
4,183,881	-				-0.8
4,183,881	-				+0.1
4,183,881	-				-0.9
4,183,940	+				+2.1
4,183,940	+				-0.2
4,183,941	-				-0.2
4,183,941	-				-0.3
4,183,941	-				+1.6
4,183,961	-		Sama_3552	0.11	-0.7
4,183,965	+		Sama_3552	0.12	-0.3
4,183,966	-		Sama_3552	0.12	+1.3
4,183,966	-		Sama_3552	0.12	-0.0
4,183,966	-		Sama_3552	0.12	-0.4
4,183,966	-		Sama_3552	0.12	-1.1
4,183,966	-		Sama_3552	0.12	-0.9
4,183,969	-		Sama_3552	0.12	+0.9
4,183,976	+		Sama_3552	0.13	-1.1
4,183,976	+		Sama_3552	0.13	+0.3
4,183,977	-		Sama_3552	0.13	-0.4
4,183,977	-		Sama_3552	0.13	-1.1
4,183,977	-		Sama_3552	0.13	-0.9
4,183,992	+		Sama_3552	0.15	-1.4
4,183,992	+		Sama_3552	0.15	-0.7
4,183,992	+		Sama_3552	0.15	+0.7
4,183,992	+		Sama_3552	0.15	-0.5
4,183,992	+		Sama_3552	0.15	+0.3
4,183,992	+		Sama_3552	0.15	-0.4
4,183,993	-		Sama_3552	0.16	-1.9
4,183,993	-		Sama_3552	0.16	-0.4
4,183,993	-		Sama_3552	0.16	-0.3
4,183,993	-		Sama_3552	0.16	+0.4
4,183,993	-		Sama_3552	0.16	+0.4
4,183,993	-		Sama_3552	0.16	-0.4
4,183,993	-		Sama_3552	0.16	+0.2
4,183,994	+		Sama_3552	0.16	-0.6
4,183,994	+		Sama_3552	0.16	+0.8
4,183,994	+		Sama_3552	0.16	+0.1
4,183,994	+		Sama_3552	0.16	+0.2
4,183,994	+		Sama_3552	0.16	+0.3
4,183,995	-		Sama_3552	0.16	+0.3
4,183,995	-		Sama_3552	0.16	-2.1
4,183,995	-		Sama_3552	0.16	-0.4
4,183,995	-		Sama_3552	0.16	+1.2
4,184,014	+		Sama_3552	0.18	+0.1
4,184,014	+		Sama_3552	0.18	+0.3
4,184,015	-		Sama_3552	0.19	-0.2
4,184,015	-		Sama_3552	0.19	+1.4
4,184,070	-		Sama_3552	0.26	-0.6
4,184,111	+		Sama_3552	0.32	-0.4
4,184,111	+		Sama_3552	0.32	-0.4
4,184,111	+		Sama_3552	0.32	-0.4
4,184,111	+		Sama_3552	0.32	-0.4
4,184,111	+		Sama_3552	0.32	-0.4
4,184,111	+		Sama_3552	0.32	-1.1
4,184,112	-		Sama_3552	0.32	+3.1
4,184,112	-		Sama_3552	0.32	-1.3
4,184,112	-		Sama_3552	0.32	+1.4
4,184,112	-		Sama_3552	0.32	-0.2
4,184,112	-		Sama_3552	0.32	-0.2
4,184,112	-		Sama_3552	0.32	-0.5
4,184,129	+		Sama_3552	0.34	-0.1
4,184,129	+		Sama_3552	0.34	-1.4
4,184,130	-		Sama_3552	0.34	-0.1
4,184,130	-		Sama_3552	0.34	+0.2
4,184,130	-		Sama_3552	0.34	+0.6
4,184,130	-		Sama_3552	0.34	+1.3
4,184,130	-		Sama_3552	0.34	-0.7
4,184,130	-		Sama_3552	0.34	-0.5
4,184,130	-		Sama_3552	0.34	-1.6
4,184,130	-		Sama_3552	0.34	+0.2
4,184,130	-		Sama_3552	0.34	-1.5
4,184,130	-		Sama_3552	0.34	-1.7
4,184,130	-		Sama_3552	0.34	+0.1
4,184,153	-		Sama_3552	0.37	-0.9
4,184,153	-		Sama_3552	0.37	+1.3
4,184,153	-		Sama_3552	0.37	-0.8
4,184,153	-		Sama_3552	0.37	+0.9
4,184,196	+		Sama_3552	0.43	+0.8
4,184,196	+		Sama_3552	0.43	-0.1
4,184,197	-		Sama_3552	0.43	-1.6
4,184,197	-		Sama_3552	0.43	-0.8
4,184,197	-		Sama_3552	0.43	-0.3
4,184,243	+		Sama_3552	0.50	-0.9
4,184,243	+		Sama_3552	0.50	-0.1
4,184,243	+		Sama_3552	0.50	+1.4
4,184,243	+		Sama_3552	0.50	-0.8
4,184,244	-		Sama_3552	0.50	+0.1
4,184,244	-		Sama_3552	0.50	+0.3
4,184,244	-		Sama_3552	0.50	-0.4
4,184,244	-		Sama_3552	0.50	+0.1
4,184,244	-		Sama_3552	0.50	-1.2
4,184,252	+		Sama_3552	0.51	+0.7
4,184,253	-		Sama_3552	0.51	-0.4
4,184,253	-		Sama_3552	0.51	-2.0
4,184,273	+		Sama_3552	0.54	-0.3
4,184,273	+		Sama_3552	0.54	-0.3
4,184,273	+		Sama_3552	0.54	+0.5
4,184,294	+		Sama_3552	0.56	-1.2
4,184,294	+		Sama_3552	0.56	+0.1
4,184,294	+		Sama_3552	0.56	+0.5
4,184,294	+		Sama_3552	0.56	-1.4
4,184,294	+		Sama_3552	0.56	-1.2
4,184,295	-		Sama_3552	0.57	-1.8
4,184,295	-		Sama_3552	0.57	+0.1
4,184,295	-		Sama_3552	0.57	-0.7
4,184,295	-		Sama_3552	0.57	-0.4
4,184,334	+		Sama_3552	0.62	-0.1
4,184,335	-		Sama_3552	0.62	-0.8
4,184,347	+		Sama_3552	0.64	+2.2
4,184,347	+		Sama_3552	0.64	-0.0
4,184,347	+		Sama_3552	0.64	-1.7
4,184,347	+		Sama_3552	0.64	-0.4
4,184,348	-		Sama_3552	0.64	-0.1
4,184,379	+		Sama_3552	0.68	-0.5
4,184,379	+		Sama_3552	0.68	+0.4
4,184,380	-		Sama_3552	0.68	-0.4
4,184,380	-		Sama_3552	0.68	-0.9
4,184,380	-		Sama_3552	0.68	+1.2
4,184,402	+		Sama_3552	0.71	-0.5
4,184,402	+		Sama_3552	0.71	-0.1
4,184,402	+		Sama_3552	0.71	+1.1
4,184,403	-		Sama_3552	0.71	-1.8
4,184,403	-		Sama_3552	0.71	-0.8
4,184,403	-		Sama_3552	0.71	-0.1
4,184,489	+		Sama_3552	0.83	-1.4
4,184,489	+		Sama_3552	0.83	+0.4
4,184,489	+		Sama_3552	0.83	-1.3
4,184,489	+		Sama_3552	0.83	-0.6
4,184,490	-		Sama_3552	0.83	+0.2
4,184,490	-		Sama_3552	0.83	+0.6
4,184,533	+		Sama_3552	0.89	-0.8
4,184,624	+				-0.4
4,184,624	+				-1.1
4,184,624	+				+0.5
4,184,624	+				-0.3
4,184,624	+				-0.4
4,184,624	+				-0.0
4,184,624	+				-0.9
4,184,625	-				-0.0
4,184,625	-				-0.0
4,184,625	-				+0.5
4,184,625	-				-1.1
4,184,625	-				+1.0
4,184,625	-				-0.6
4,184,653	+				-1.1
4,184,654	+				-0.2
4,184,655	-				-0.7
4,184,655	-				+0.6
4,184,655	-				+0.6
4,184,708	+				+0.6
4,184,708	+				+0.2
4,184,718	+				+0.1
4,184,718	+				+0.2
4,184,718	+				+2.1
4,184,719	-				+0.8
4,184,719	-				-0.2
4,184,719	-				-0.3
4,184,724	+				-1.5
4,184,724	+				+1.2
4,184,725	-				+2.2
4,184,725	-				-0.8
4,184,725	-				+0.6
4,184,725	-				-0.8
4,184,748	+				-0.1
4,184,775	+				-0.5
4,184,776	-				+0.2
4,184,787	+				+1.1
4,184,797	+				+1.4
4,184,798	-				-0.4
4,184,820	+				-1.5
4,184,820	+				-0.7
4,184,820	+				-0.1
4,184,821	-				-0.8
4,184,821	-				+0.3
4,184,821	-				-0.5
4,184,821	-				+0.6
4,184,836	+				+0.8
4,184,837	-				-1.3
4,184,837	-				-1.7
4,184,883	+				-0.5
4,184,883	+				-0.1
4,184,884	-				-0.9
4,184,884	-				+1.2
4,184,896	-				-2.8
4,184,960	+				-0.2
4,184,960	+				-0.4
4,184,960	+				-0.3
4,184,961	-				-2.2
4,184,961	-				+0.3
4,185,007	+				-0.4
4,185,007	+				+0.1
4,185,008	-				+0.3
4,185,008	-				+0.3
4,185,206	+		Sama_3553	0.20	-1.0
4,185,206	+		Sama_3553	0.20	-0.4
4,185,206	+		Sama_3553	0.20	-0.2
4,185,206	+		Sama_3553	0.20	-1.0
4,185,206	+		Sama_3553	0.20	-2.4
4,185,207	-		Sama_3553	0.20	+0.1
4,185,249	+		Sama_3553	0.24	+0.3
4,185,270	+		Sama_3553	0.26	-1.1
4,185,270	+		Sama_3553	0.26	+0.3
4,185,270	+		Sama_3553	0.26	-0.5
4,185,270	+		Sama_3553	0.26	-1.0
4,185,271	-		Sama_3553	0.26	-1.5
4,185,271	-		Sama_3553	0.26	-0.2
4,185,271	-		Sama_3553	0.26	-0.8
4,185,271	-		Sama_3553	0.26	+0.1
4,185,272	+		Sama_3553	0.26	-0.1
4,185,272	+		Sama_3553	0.26	-0.9
4,185,272	+		Sama_3553	0.26	-0.5
4,185,273	-		Sama_3553	0.26	-0.5
4,185,273	-		Sama_3553	0.26	-0.1
4,185,273	-		Sama_3553	0.26	+1.6
4,185,418	-		Sama_3553	0.39	+0.3
4,185,418	-		Sama_3553	0.39	-2.1
4,185,418	-		Sama_3553	0.39	-0.2
4,185,418	-		Sama_3553	0.39	-2.1
4,185,419	+		Sama_3553	0.39	+0.6
4,185,419	+		Sama_3553	0.39	-1.4
4,185,419	+		Sama_3553	0.39	-0.5
4,185,473	+		Sama_3553	0.44	-1.9
4,185,473	+		Sama_3553	0.44	-1.4
4,185,473	+		Sama_3553	0.44	-1.9
4,185,486	+		Sama_3553	0.45	+0.6
4,185,486	+		Sama_3553	0.45	-1.6
4,185,486	+		Sama_3553	0.45	-1.9
4,185,486	+		Sama_3553	0.45	-0.7
4,185,486	+		Sama_3553	0.45	-0.8
4,185,486	+		Sama_3553	0.45	-0.5
4,185,487	-		Sama_3553	0.45	-0.4
4,185,487	-		Sama_3553	0.45	-1.0
4,185,574	+		Sama_3553	0.53	-0.7
4,185,574	+		Sama_3553	0.53	-0.3
4,185,575	-		Sama_3553	0.53	+0.5
4,185,584	+		Sama_3553	0.53	-1.1
4,185,584	+		Sama_3553	0.53	-0.2
4,185,584	+		Sama_3553	0.53	-0.7
4,185,585	-		Sama_3553	0.54	-2.0