Strain Fitness in Shewanella amazonensis SB2B around Sama_3238

Experiment: Zinc 0.3125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Zinc 0.3125 mM
3,830,254	+		Sama_3236	0.48	-0.2
3,830,255	-		Sama_3236	0.48	-1.0
3,830,266	-		Sama_3236	0.49	+1.5
3,830,266	-		Sama_3236	0.49	+0.1
3,830,286	-		Sama_3236	0.52	-1.1
3,830,397	+		Sama_3236	0.68	+0.9
3,830,398	-		Sama_3236	0.68	-0.1
3,830,425	+		Sama_3236	0.72	-0.2
3,830,425	+		Sama_3236	0.72	-0.1
3,830,426	-		Sama_3236	0.72	-0.3
3,830,426	-		Sama_3236	0.72	+0.1
3,830,426	-		Sama_3236	0.72	+0.4
3,830,426	-		Sama_3236	0.72	-0.8
3,830,426	-		Sama_3236	0.72	+0.8
3,830,454	+		Sama_3236	0.76	+0.5
3,830,455	-		Sama_3236	0.76	-1.2
3,830,471	+		Sama_3236	0.78	-1.2
3,830,525	-		Sama_3236	0.86	-0.1
3,830,635	-				-0.5
3,830,635	-				-0.2
3,830,678	+				-1.8
3,830,678	+				-0.6
3,830,750	+		Sama_3237	0.22	-1.4
3,830,750	+		Sama_3237	0.22	-0.6
3,830,751	-		Sama_3237	0.23	-1.0
3,830,751	-		Sama_3237	0.23	-0.1
3,830,756	+		Sama_3237	0.24	-0.1
3,830,757	-		Sama_3237	0.24	-0.2
3,830,782	+		Sama_3237	0.29	+0.2
3,830,782	+		Sama_3237	0.29	+0.9
3,830,782	+		Sama_3237	0.29	+0.5
3,830,782	+		Sama_3237	0.29	-0.3
3,830,782	+		Sama_3237	0.29	-0.9
3,830,782	+		Sama_3237	0.29	+0.1
3,830,783	-		Sama_3237	0.29	+0.3
3,830,783	-		Sama_3237	0.29	-1.4
3,830,783	-		Sama_3237	0.29	-0.1
3,830,783	-		Sama_3237	0.29	+0.3
3,830,783	-		Sama_3237	0.29	-0.8
3,830,783	-		Sama_3237	0.29	-0.9
3,830,783	-		Sama_3237	0.29	+0.5
3,830,804	+		Sama_3237	0.34	+0.1
3,830,805	-		Sama_3237	0.34	-0.5
3,830,805	-		Sama_3237	0.34	-0.2
3,830,805	-		Sama_3237	0.34	-1.0
3,830,842	+		Sama_3237	0.42	-0.6
3,830,842	+		Sama_3237	0.42	-0.5
3,830,843	-		Sama_3237	0.42	-0.5
3,830,843	-		Sama_3237	0.42	+0.8
3,830,843	-		Sama_3237	0.42	+0.1
3,830,873	+		Sama_3237	0.49	-0.1
3,830,873	+		Sama_3237	0.49	-0.7
3,830,874	-		Sama_3237	0.49	-0.5
3,830,874	-		Sama_3237	0.49	-0.6
3,830,874	-		Sama_3237	0.49	-1.0
3,830,875	+		Sama_3237	0.49	-0.3
3,830,875	+		Sama_3237	0.49	+0.9
3,830,875	+		Sama_3237	0.49	-1.6
3,830,875	+		Sama_3237	0.49	-0.3
3,830,875	+		Sama_3237	0.49	-0.0
3,830,875	+		Sama_3237	0.49	-0.3
3,830,875	+		Sama_3237	0.49	+2.5
3,830,875	+		Sama_3237	0.49	+0.6
3,830,875	+		Sama_3237	0.49	+2.8
3,830,875	+		Sama_3237	0.49	-1.2
3,830,875	+		Sama_3237	0.49	-0.2
3,830,875	+		Sama_3237	0.49	+1.8
3,830,875	+		Sama_3237	0.49	-0.3
3,830,876	-		Sama_3237	0.49	+1.5
3,830,876	-		Sama_3237	0.49	-0.8
3,830,876	-		Sama_3237	0.49	-0.5
3,830,876	-		Sama_3237	0.49	+0.4
3,830,876	-		Sama_3237	0.49	-0.3
3,830,876	-		Sama_3237	0.49	+0.3
3,830,876	-		Sama_3237	0.49	-0.5
3,830,876	-		Sama_3237	0.49	+0.2
3,830,876	-		Sama_3237	0.49	+1.5
3,830,919	+		Sama_3237	0.59	+0.2
3,830,920	-		Sama_3237	0.59	+0.2
3,830,929	+		Sama_3237	0.61	-0.0
3,830,930	-		Sama_3237	0.61	-0.9
3,830,930	-		Sama_3237	0.61	-0.4
3,830,930	-		Sama_3237	0.61	-0.2
3,830,930	-		Sama_3237	0.61	+0.4
3,830,930	-		Sama_3237	0.61	+0.1
3,830,930	-		Sama_3237	0.61	-0.8
3,831,011	+		Sama_3237	0.78	-0.3
3,831,012	-		Sama_3237	0.79	-1.1
3,831,087	+				-1.3
3,831,088	-				+0.5
3,831,102	-				+2.9
3,831,111	+				+1.1
3,831,112	-				+1.4
3,831,112	-				+0.3
3,831,112	-				-0.4
3,831,114	+				+0.3
3,831,115	-				-0.8
3,831,115	-				-0.2
3,831,160	+				+0.7
3,831,160	+				+1.5
3,831,161	-				-1.6
3,831,182	+				+0.6
3,831,182	+				-0.3
3,831,183	-				-0.1
3,831,183	-				-1.8
3,831,183	-				-2.0
3,831,183	-				+1.1
3,831,184	+				-0.8
3,831,191	+				+0.5
3,831,191	+				-0.5
3,831,191	+				+0.9
3,831,191	+				-0.8
3,831,191	+				-1.1
3,831,191	+				+0.7
3,831,191	+				-0.9
3,831,192	-				-0.1
3,831,192	-				+0.9
3,831,192	-				-1.6
3,831,192	-				-1.3
3,831,192	-				-1.1
3,831,192	-				-0.5
3,831,192	-				+0.9
3,831,192	-				+0.6
3,831,192	-				-1.0
3,831,192	-				-0.9
3,831,192	-				+0.3
3,831,193	+				+1.8
3,831,193	+				+0.5
3,831,194	-				-0.1
3,831,194	-				+3.8
3,831,194	-				+0.0
3,831,194	-				-0.6
3,831,223	+				+0.7
3,831,223	+				+0.8
3,831,223	+				+0.8
3,831,223	+				-1.9
3,831,223	+				+0.4
3,831,224	-				-0.3
3,831,224	-				+1.3
3,831,224	-				-0.3
3,831,226	+				+0.2
3,831,226	+				-0.7
3,831,226	+				+2.5
3,831,288	+				-1.6
3,831,288	+				-2.1
3,831,289	-				+0.1
3,831,289	-				+1.5
3,831,289	-				+1.1
3,831,290	+				-0.9
3,831,290	+				+1.0
3,831,290	+				-0.8
3,831,290	+				-0.6
3,831,290	+				+0.2
3,831,290	+				-0.3
3,831,290	+				-0.6
3,831,290	+				-0.2
3,831,290	+				-1.1
3,831,291	-				-0.4
3,831,291	-				-0.2
3,831,291	-				+0.4
3,831,386	+		Sama_3238	0.17	-0.5
3,831,386	+		Sama_3238	0.17	+0.2
3,831,387	-		Sama_3238	0.17	+0.2
3,831,394	+		Sama_3238	0.18	-0.8
3,831,394	+		Sama_3238	0.18	-0.0
3,831,394	+		Sama_3238	0.18	+0.0
3,831,394	+		Sama_3238	0.18	-0.5
3,831,394	+		Sama_3238	0.18	-0.4
3,831,394	+		Sama_3238	0.18	-0.1
3,831,394	+		Sama_3238	0.18	-0.0
3,831,394	+		Sama_3238	0.18	+0.1
3,831,394	+		Sama_3238	0.18	-0.3
3,831,394	+		Sama_3238	0.18	+0.9
3,831,395	-		Sama_3238	0.18	+0.5
3,831,395	-		Sama_3238	0.18	-0.7
3,831,395	-		Sama_3238	0.18	-0.4
3,831,515	+		Sama_3238	0.31	+0.4
3,831,516	-		Sama_3238	0.31	+0.3
3,831,647	+		Sama_3238	0.45	+0.5
3,831,647	+		Sama_3238	0.45	+0.3
3,831,648	-		Sama_3238	0.45	-0.7
3,831,648	-		Sama_3238	0.45	-0.8
3,831,738	+		Sama_3238	0.54	+0.1
3,831,739	-		Sama_3238	0.55	-0.9
3,831,739	-		Sama_3238	0.55	-0.5
3,831,798	+		Sama_3238	0.61	+0.7
3,831,799	-		Sama_3238	0.61	+0.0
3,831,888	+		Sama_3238	0.70	+0.4
3,831,889	-		Sama_3238	0.70	+0.4
3,831,889	-		Sama_3238	0.70	+0.2
3,831,889	-		Sama_3238	0.70	+0.8
3,831,905	+		Sama_3238	0.72	-0.1
3,831,905	+		Sama_3238	0.72	-0.5
3,831,926	+		Sama_3238	0.74	+0.3
3,831,927	-		Sama_3238	0.75	-0.2
3,831,990	+		Sama_3238	0.81	+2.5
3,831,990	+		Sama_3238	0.81	-1.2
3,831,990	+		Sama_3238	0.81	-0.9
3,831,991	-		Sama_3238	0.81	-0.3
3,832,015	+		Sama_3238	0.84	+0.9
3,832,016	-		Sama_3238	0.84	+0.9
3,832,016	-		Sama_3238	0.84	-0.1
3,832,016	-		Sama_3238	0.84	+0.1
3,832,047	+		Sama_3238	0.87	-0.4
3,832,048	-		Sama_3238	0.87	-0.1
3,832,058	-		Sama_3238	0.88	+0.5
3,832,166	+				+0.6
3,832,166	+				-0.3
3,832,166	+				+0.2
3,832,166	+				+0.2
3,832,166	+				-0.5
3,832,166	+				+0.1
3,832,166	+				-1.1
3,832,166	+				-1.2
3,832,167	-				+0.8
3,832,167	-				-0.5
3,832,167	-				-0.3
3,832,181	-				-0.2
3,832,258	-				+0.1
3,832,269	-				-1.3
3,832,351	+				-2.4
3,832,351	+				-0.2
3,832,352	-				-0.8
3,832,352	-				-0.0
3,832,358	+				+0.3
3,832,358	+				+1.8
3,832,359	-				-1.1
3,832,359	-				+0.6
3,832,359	-				-0.3
3,832,359	-				-0.4
3,832,359	-				-1.1
3,832,381	-				-0.9
3,832,381	-				-0.8
3,832,381	-				+0.6
3,832,389	+				+0.1
3,832,409	-				+0.7
3,832,461	+				+0.3
3,832,461	+				-0.5
3,832,470	+				-0.1
3,832,470	+				-1.2
3,832,470	+				+0.4
3,832,470	+				+0.9
3,832,470	+				-0.6
3,832,470	+				-0.6
3,832,470	+				-0.8
3,832,471	-				-2.4
3,832,471	-				-0.1
3,832,471	-				-0.5
3,832,471	-				-1.8
3,832,471	-				-1.5
3,832,471	-				-1.2
3,832,471	-				-0.1
3,832,471	-				+0.8
3,832,471	-				-0.7
3,832,479	+				+0.5
3,832,480	-				+0.3
3,832,480	-				-0.8
3,832,480	-				-0.1
3,832,480	-				-0.5
3,832,504	+		Sama_3239	0.12	+0.0
3,832,504	+		Sama_3239	0.12	+0.5
3,832,504	+		Sama_3239	0.12	+0.9
3,832,504	+		Sama_3239	0.12	-1.0
3,832,504	+		Sama_3239	0.12	+0.6
3,832,504	+		Sama_3239	0.12	-1.3
3,832,504	+		Sama_3239	0.12	-1.7
3,832,592	+		Sama_3239	0.21	+0.5
3,832,592	+		Sama_3239	0.21	+0.9
3,832,592	+		Sama_3239	0.21	+0.9
3,832,593	-		Sama_3239	0.21	-0.1
3,832,593	-		Sama_3239	0.21	-0.3
3,832,593	-		Sama_3239	0.21	+0.2
3,832,593	-		Sama_3239	0.21	-0.1
3,832,593	-		Sama_3239	0.21	+0.3
3,832,596	+		Sama_3239	0.21	+0.1
3,832,596	+		Sama_3239	0.21	-1.8
3,832,596	+		Sama_3239	0.21	-0.7
3,832,596	+		Sama_3239	0.21	+0.9
3,832,596	+		Sama_3239	0.21	-0.3
3,832,597	-		Sama_3239	0.21	-0.2
3,832,597	-		Sama_3239	0.21	+0.1
3,832,597	-		Sama_3239	0.21	-0.8
3,832,597	-		Sama_3239	0.21	-0.6
3,832,597	-		Sama_3239	0.21	+1.5
3,832,627	-		Sama_3239	0.24	-1.3
3,832,657	+		Sama_3239	0.27	+0.2
3,832,657	+		Sama_3239	0.27	+0.1
3,832,657	+		Sama_3239	0.27	-1.0
3,832,657	+		Sama_3239	0.27	-0.8
3,832,658	-		Sama_3239	0.27	-1.9
3,832,658	-		Sama_3239	0.27	+1.5
3,832,658	-		Sama_3239	0.27	+0.5
3,832,658	-		Sama_3239	0.27	-0.1
3,832,658	-		Sama_3239	0.27	-0.2
3,832,658	-		Sama_3239	0.27	+0.8
3,832,658	-		Sama_3239	0.27	-1.2
3,832,658	-		Sama_3239	0.27	+0.7
3,832,658	-		Sama_3239	0.27	-0.8
3,832,658	-		Sama_3239	0.27	-0.9
3,832,658	-		Sama_3239	0.27	+0.2
3,832,659	+		Sama_3239	0.28	+0.8
3,832,659	+		Sama_3239	0.28	-1.2
3,832,659	+		Sama_3239	0.28	+0.8
3,832,659	+		Sama_3239	0.28	+0.0
3,832,659	+		Sama_3239	0.28	-0.1
3,832,659	+		Sama_3239	0.28	-0.3
3,832,659	+		Sama_3239	0.28	-1.0
3,832,659	+		Sama_3239	0.28	-0.9
3,832,659	+		Sama_3239	0.28	+0.6
3,832,659	+		Sama_3239	0.28	-0.7
3,832,659	+		Sama_3239	0.28	+0.2
3,832,659	+		Sama_3239	0.28	+0.0
3,832,660	-		Sama_3239	0.28	+1.2
3,832,660	-		Sama_3239	0.28	+0.1
3,832,660	-		Sama_3239	0.28	+0.2
3,832,660	-		Sama_3239	0.28	+0.3
3,832,660	-		Sama_3239	0.28	-1.0
3,832,660	-		Sama_3239	0.28	-1.2
3,832,660	-		Sama_3239	0.28	+1.3
3,832,660	-		Sama_3239	0.28	-0.9
3,832,674	+		Sama_3239	0.29	-2.3
3,832,675	-		Sama_3239	0.29	+0.0
3,832,677	+		Sama_3239	0.29	-1.5
3,832,677	+		Sama_3239	0.29	-0.3
3,832,677	+		Sama_3239	0.29	+1.2
3,832,677	+		Sama_3239	0.29	-1.4
3,832,677	+		Sama_3239	0.29	-0.3
3,832,677	+		Sama_3239	0.29	+0.1
3,832,678	-		Sama_3239	0.29	-0.7
3,832,678	-		Sama_3239	0.29	-0.4
3,832,725	+		Sama_3239	0.34	+1.5
3,832,725	+		Sama_3239	0.34	-0.7
3,832,726	-		Sama_3239	0.34	-0.1
3,832,726	-		Sama_3239	0.34	-0.2
3,832,766	+		Sama_3239	0.38	+1.1
3,832,767	-		Sama_3239	0.38	+0.2
3,832,806	+		Sama_3239	0.42	-0.6
3,832,806	+		Sama_3239	0.42	+0.5
3,832,807	-		Sama_3239	0.42	-0.9
3,832,821	+		Sama_3239	0.43	-0.5
3,832,821	+		Sama_3239	0.43	+0.3
3,832,821	+		Sama_3239	0.43	+0.5
3,832,822	-		Sama_3239	0.44	-0.3
3,832,822	-		Sama_3239	0.44	+0.1
3,832,822	-		Sama_3239	0.44	+0.5
3,832,872	+		Sama_3239	0.48	-0.3
3,832,872	+		Sama_3239	0.48	-0.1
3,832,872	+		Sama_3239	0.48	-1.6
3,832,873	-		Sama_3239	0.49	+0.4
3,832,873	-		Sama_3239	0.49	-0.7
3,832,873	-		Sama_3239	0.49	-0.5
3,832,893	+		Sama_3239	0.51	+0.4
3,832,893	+		Sama_3239	0.51	-0.8
3,832,893	+		Sama_3239	0.51	-1.1
3,832,894	-		Sama_3239	0.51	+1.5
3,832,894	-		Sama_3239	0.51	-1.5
3,832,894	-		Sama_3239	0.51	-0.1
3,832,911	+		Sama_3239	0.52	+0.5
3,832,911	+		Sama_3239	0.52	-2.3
3,832,911	+		Sama_3239	0.52	-0.9
3,832,911	+		Sama_3239	0.52	-1.1
3,832,911	+		Sama_3239	0.52	-1.7
3,832,911	+		Sama_3239	0.52	-0.1
3,832,912	-		Sama_3239	0.52	-0.7
3,832,912	-		Sama_3239	0.52	-0.1
3,832,912	-		Sama_3239	0.52	-0.4
3,832,912	-		Sama_3239	0.52	+0.5
3,832,912	-		Sama_3239	0.52	-1.2
3,832,915	+		Sama_3239	0.53	-2.0
3,832,915	+		Sama_3239	0.53	-0.4
3,832,916	-		Sama_3239	0.53	+0.5
3,832,916	-		Sama_3239	0.53	-0.5
3,832,916	-		Sama_3239	0.53	-0.8
3,832,916	-		Sama_3239	0.53	+0.5
3,832,916	-		Sama_3239	0.53	-0.3
3,832,945	+		Sama_3239	0.56	+0.1
3,833,003	+		Sama_3239	0.61	+0.3
3,833,003	+		Sama_3239	0.61	-0.2
3,833,003	+		Sama_3239	0.61	-0.1
3,833,003	+		Sama_3239	0.61	+0.1
3,833,003	+		Sama_3239	0.61	-1.0
3,833,003	+		Sama_3239	0.61	+0.1
3,833,004	-		Sama_3239	0.61	-0.5
3,833,004	-		Sama_3239	0.61	-0.4
3,833,004	-		Sama_3239	0.61	+0.1
3,833,004	-		Sama_3239	0.61	-1.3
3,833,004	-		Sama_3239	0.61	-0.5
3,833,004	-		Sama_3239	0.61	+0.1
3,833,005	+		Sama_3239	0.62	-0.1
3,833,005	+		Sama_3239	0.62	-2.2
3,833,006	-		Sama_3239	0.62	-0.2
3,833,006	-		Sama_3239	0.62	-0.9
3,833,006	-		Sama_3239	0.62	-1.6
3,833,112	+		Sama_3239	0.72	+0.2
3,833,112	+		Sama_3239	0.72	+1.5
3,833,112	+		Sama_3239	0.72	-1.7
3,833,112	+		Sama_3239	0.72	+0.3
3,833,112	+		Sama_3239	0.72	-1.7
3,833,112	+		Sama_3239	0.72	+1.9
3,833,112	+		Sama_3239	0.72	+0.6
3,833,112	+		Sama_3239	0.72	-0.6
3,833,113	-		Sama_3239	0.72	-0.9
3,833,113	-		Sama_3239	0.72	+0.6
3,833,113	-		Sama_3239	0.72	+0.3
3,833,113	-		Sama_3239	0.72	-0.8
3,833,113	-		Sama_3239	0.72	+0.7
3,833,113	-		Sama_3239	0.72	+0.3
3,833,113	-		Sama_3239	0.72	+1.4
3,833,113	-		Sama_3239	0.72	+0.1
3,833,113	-		Sama_3239	0.72	-0.2
3,833,120	-		Sama_3239	0.73	-0.1
3,833,155	+		Sama_3239	0.76	+0.1
3,833,155	+		Sama_3239	0.76	+0.3
3,833,156	-		Sama_3239	0.76	-0.3