Experiment: Zinc 0.3125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_2584 and Sama_2585 are separated by 1 nucleotides Sama_2585 and Sama_2586 are separated by 72 nucleotides Sama_2586 and Sama_2587 overlap by 1 nucleotides Sama_2587 and Sama_2588 are separated by 64 nucleotides
Sama_2584: Sama_2584 - DNA-directed DNA polymerase (RefSeq), at 3,092,790 to 3,093,818
_2584
Sama_2585: Sama_2585 - nicotinate-nucleotide adenylyltransferase (RefSeq), at 3,093,820 to 3,094,470
_2585
Sama_2586: Sama_2586 - iojap domain-containing protein (RefSeq), at 3,094,543 to 3,094,869
_2586
Sama_2587: Sama_2587 - rRNA large subunit methyltransferase (RefSeq), at 3,094,869 to 3,095,339
_2587
Sama_2588: Sama_2588 - peptidoglycan glycosyltransferase (RefSeq), at 3,095,404 to 3,097,236
_2588
Position (kb)
3094
3095 Strain fitness (log2 ratio)
-2
-1
0
1 at 3093.819 kb on + strand at 3093.819 kb on + strand at 3093.819 kb on + strand at 3093.819 kb on + strand at 3093.819 kb on + strand at 3093.820 kb on - strand at 3093.825 kb on + strand at 3093.849 kb on + strand at 3094.499 kb on - strand at 3094.534 kb on + strand at 3094.578 kb on + strand, within Sama_2586 at 3094.593 kb on + strand, within Sama_2586 at 3094.593 kb on + strand, within Sama_2586 at 3094.613 kb on + strand, within Sama_2586 at 3094.648 kb on + strand, within Sama_2586 at 3094.648 kb on + strand, within Sama_2586 at 3094.648 kb on + strand, within Sama_2586 at 3094.648 kb on + strand, within Sama_2586 at 3094.648 kb on + strand, within Sama_2586 at 3094.737 kb on + strand, within Sama_2586 at 3094.737 kb on + strand, within Sama_2586 at 3094.935 kb on + strand, within Sama_2587 at 3094.958 kb on + strand, within Sama_2587 at 3095.075 kb on + strand, within Sama_2587 at 3095.309 kb on + strand at 3095.325 kb on + strand at 3095.337 kb on + strand at 3095.337 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.3125 mM remove 3,093,819 + +0.9 3,093,819 + +0.5 3,093,819 + -0.1 3,093,819 + -1.6 3,093,819 + -0.1 3,093,820 - -0.3 3,093,825 + +0.8 3,093,849 + -1.3 3,094,499 - -0.8 3,094,534 + -0.9 3,094,578 + Sama_2586 0.11 -0.6 3,094,593 + Sama_2586 0.15 +1.5 3,094,593 + Sama_2586 0.15 -0.9 3,094,613 + Sama_2586 0.21 -0.7 3,094,648 + Sama_2586 0.32 -1.1 3,094,648 + Sama_2586 0.32 -0.3 3,094,648 + Sama_2586 0.32 -0.1 3,094,648 + Sama_2586 0.32 -1.5 3,094,648 + Sama_2586 0.32 -1.8 3,094,737 + Sama_2586 0.59 -1.2 3,094,737 + Sama_2586 0.59 -0.8 3,094,935 + Sama_2587 0.14 -1.7 3,094,958 + Sama_2587 0.19 -0.1 3,095,075 + Sama_2587 0.44 +0.2 3,095,309 + -0.1 3,095,325 + -1.1 3,095,337 + +1.1 3,095,337 + -0.3
Or see this region's nucleotide sequence