Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c09370

Experiment: m.b. nitrite 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 6 mM
955,502	+		PGA1_c09350	0.64	+0.2
955,587	-		PGA1_c09350	0.70	-1.2
955,666	-		PGA1_c09350	0.76	-1.5
955,703	+		PGA1_c09350	0.78	+0.2
955,783	+		PGA1_c09350	0.84	+1.2
955,845	+		PGA1_c09350	0.89	-1.7
955,860	+				-0.6
955,863	-				+1.1
955,873	-				-0.8
955,890	-				-1.0
955,905	+				+1.3
955,923	+				+0.5
955,933	+				+0.4
955,933	+				+1.0
955,933	+				-1.9
955,938	+				-2.7
955,938	+				-0.9
955,938	+				+2.1
955,938	+				-0.1
955,938	+				-0.1
955,938	+				-1.1
955,941	-				-0.2
955,941	-				+0.7
955,941	-				-0.5
955,941	-				+0.3
955,946	-				+0.5
955,946	-				-1.1
955,946	-				+0.8
955,946	-				+1.2
955,946	-				-0.1
955,946	-				-0.1
955,946	-				+0.3
955,956	-				+0.2
955,999	+				+0.6
956,002	-				+0.5
956,065	-				-3.3
956,135	+				+0.1
956,135	+				+1.3
956,135	+				-2.6
956,143	-				-0.1
956,143	-				-2.3
956,146	-				-2.5
956,146	-				-1.1
956,146	-				-1.9
956,146	-				+1.8
956,332	-				+0.5
956,384	-				-0.7
956,384	-				+0.8
956,384	-				+1.7
956,469	+				+0.4
956,493	-				+0.3
956,620	-				-0.2
956,701	+				-2.0
956,763	-		PGA1_c09380	0.14	-1.5
956,763	-		PGA1_c09380	0.14	-1.6
956,768	+		PGA1_c09380	0.14	-0.7
956,776	-		PGA1_c09380	0.15	-0.9
956,776	-		PGA1_c09380	0.15	-0.2
956,776	-		PGA1_c09380	0.15	-1.5
956,824	+		PGA1_c09380	0.20	-1.3
956,891	-		PGA1_c09380	0.28	+0.4
956,918	+		PGA1_c09380	0.31	+0.7
956,926	-		PGA1_c09380	0.31	+0.3
956,926	-		PGA1_c09380	0.31	+1.5
956,928	+		PGA1_c09380	0.32	+2.0
956,931	-		PGA1_c09380	0.32	+1.1
956,936	-		PGA1_c09380	0.33	-0.1
956,936	-		PGA1_c09380	0.33	+0.2
956,936	-		PGA1_c09380	0.33	-1.2
956,971	-		PGA1_c09380	0.36	-0.0
957,021	+		PGA1_c09380	0.42	+0.3
957,021	+		PGA1_c09380	0.42	-2.0
957,029	-		PGA1_c09380	0.43	+0.3
957,061	-		PGA1_c09380	0.46	-3.0
957,098	-		PGA1_c09380	0.50	-0.7
957,103	-		PGA1_c09380	0.51	+0.0
957,105	+		PGA1_c09380	0.51	-0.9
957,171	-		PGA1_c09380	0.58	+0.3
957,180	+		PGA1_c09380	0.59	-1.2
957,255	-		PGA1_c09380	0.68	-1.8
957,307	+		PGA1_c09380	0.73	+0.9
957,358	-		PGA1_c09380	0.79	-1.7
957,380	-		PGA1_c09380	0.81	-0.8
957,445	-		PGA1_c09380	0.88	-1.8
957,451	+		PGA1_c09380	0.89	-1.9
957,468	+				-1.7
957,496	-				-1.6
957,516	+				-1.0
957,516	+				+0.0
957,519	-				+0.5