Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c36460

Experiment: m.b. nitrite 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 6 mM
3,814,299	+		PGA1_c36440	0.85	+0.5
3,814,348	+				-0.5
3,814,360	+				-0.4
3,814,360	+				-1.9
3,814,360	+				-2.6
3,814,368	-				-0.7
3,814,399	+				-0.4
3,814,455	+				+0.0
3,814,455	+				+0.0
3,814,463	-				+1.4
3,814,463	-				+1.2
3,814,502	+				-1.2
3,814,502	-				+0.5
3,814,576	+		PGA1_c36450	0.17	+1.3
3,814,579	+		PGA1_c36450	0.17	+0.3
3,814,618	+		PGA1_c36450	0.22	+1.1
3,814,633	-		PGA1_c36450	0.24	-0.2
3,814,672	-		PGA1_c36450	0.30	-0.8
3,814,686	-		PGA1_c36450	0.32	+1.6
3,814,686	-		PGA1_c36450	0.32	+2.1
3,814,745	-		PGA1_c36450	0.40	+0.3
3,814,826	-		PGA1_c36450	0.51	-0.9
3,814,865	+		PGA1_c36450	0.56	+0.8
3,814,953	-		PGA1_c36450	0.68	-0.3
3,814,964	+		PGA1_c36450	0.70	+1.8
3,814,968	+		PGA1_c36450	0.70	+0.1
3,814,976	-		PGA1_c36450	0.71	-0.9
3,814,982	+		PGA1_c36450	0.72	-0.7
3,815,054	+		PGA1_c36450	0.82	-1.0
3,815,055	+		PGA1_c36450	0.82	-0.5
3,815,071	-		PGA1_c36450	0.84	+1.3
3,815,121	+				+0.6
3,815,124	-				+1.2
3,815,176	+				+0.8
3,815,221	+				+0.7
3,815,244	-				-0.4
3,815,263	+				-0.2
3,815,263	+				+0.8
3,815,263	+				+0.1
3,815,263	+				+0.7
3,815,263	+				-0.5
3,815,263	+				+0.1
3,815,271	-				-0.1
3,815,271	-				+0.7
3,815,271	-				+1.6
3,815,271	-				-1.8
3,815,580	+		PGA1_c36460	0.20	+0.5
3,815,592	+		PGA1_c36460	0.21	-0.7
3,815,620	+		PGA1_c36460	0.23	-0.9
3,815,620	+		PGA1_c36460	0.23	-0.6
3,815,628	+		PGA1_c36460	0.24	+1.8
3,815,642	+		PGA1_c36460	0.25	-0.8
3,815,642	+		PGA1_c36460	0.25	-1.5
3,815,642	+		PGA1_c36460	0.25	+0.1
3,815,743	-		PGA1_c36460	0.32	+0.0
3,815,783	+		PGA1_c36460	0.35	-1.9
3,815,786	-		PGA1_c36460	0.35	-0.1
3,815,805	+		PGA1_c36460	0.36	+0.6
3,815,878	+		PGA1_c36460	0.42	-0.7
3,815,928	-		PGA1_c36460	0.45	+1.6
3,816,086	+		PGA1_c36460	0.57	-2.0
3,816,087	-		PGA1_c36460	0.57	-1.7
3,816,097	+		PGA1_c36460	0.57	+0.7
3,816,099	-		PGA1_c36460	0.57	-1.6
3,816,104	-		PGA1_c36460	0.58	-0.4
3,816,104	-		PGA1_c36460	0.58	+2.9
3,816,113	+		PGA1_c36460	0.58	+0.5
3,816,121	-		PGA1_c36460	0.59	-2.5
3,816,191	+		PGA1_c36460	0.64	-0.9
3,816,199	-		PGA1_c36460	0.65	-3.2
3,816,204	+		PGA1_c36460	0.65	-0.1
3,816,212	-		PGA1_c36460	0.66	-3.2
3,816,227	+		PGA1_c36460	0.67	+0.4
3,816,235	-		PGA1_c36460	0.67	-0.4
3,816,235	-		PGA1_c36460	0.67	-1.7
3,816,274	+		PGA1_c36460	0.70	+0.6
3,816,282	-		PGA1_c36460	0.71	-0.9
3,816,282	-		PGA1_c36460	0.71	+1.1
3,816,282	-		PGA1_c36460	0.71	-0.6
3,816,284	-		PGA1_c36460	0.71	+0.4
3,816,295	+		PGA1_c36460	0.72	+1.3
3,816,357	-		PGA1_c36460	0.76	-1.0
3,816,409	+		PGA1_c36460	0.80	+0.3
3,816,409	+		PGA1_c36460	0.80	-2.1
3,816,417	-		PGA1_c36460	0.80	-1.2
3,816,417	-		PGA1_c36460	0.80	-0.3
3,816,417	-		PGA1_c36460	0.80	+1.2
3,816,417	-		PGA1_c36460	0.80	-0.9
3,816,473	+		PGA1_c36460	0.84	-0.2
3,816,481	-		PGA1_c36460	0.85	-0.8
3,816,512	-		PGA1_c36460	0.87	-0.9
3,816,639	+				-0.3
3,816,690	+				-1.0
3,816,699	+				+0.5