Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35030

Experiment: m.b. nitrite 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 6 mM
3,675,814	+		PGA1_c35020	0.28	+1.0
3,675,926	-		PGA1_c35020	0.38	-2.4
3,675,936	-		PGA1_c35020	0.39	+2.1
3,675,994	+		PGA1_c35020	0.45	+0.6
3,676,002	-		PGA1_c35020	0.45	-0.1
3,676,031	+		PGA1_c35020	0.48	-0.4
3,676,039	-		PGA1_c35020	0.49	-0.2
3,676,102	+		PGA1_c35020	0.55	-2.0
3,676,186	-		PGA1_c35020	0.62	-2.0
3,676,196	+		PGA1_c35020	0.63	-3.5
3,676,198	+		PGA1_c35020	0.64	-0.7
3,676,204	-		PGA1_c35020	0.64	-0.5
3,676,206	+		PGA1_c35020	0.64	-0.3
3,676,209	-		PGA1_c35020	0.65	-1.5
3,676,231	+		PGA1_c35020	0.67	-1.7
3,676,247	-		PGA1_c35020	0.68	+0.1
3,676,321	+		PGA1_c35020	0.75	-2.1
3,676,359	-		PGA1_c35020	0.79	-0.2
3,676,378	+		PGA1_c35020	0.80	-0.3
3,676,386	-		PGA1_c35020	0.81	+0.2
3,676,386	-		PGA1_c35020	0.81	+1.5
3,676,393	+		PGA1_c35020	0.82	+0.1
3,676,439	+		PGA1_c35020	0.86	-0.2
3,676,481	-		PGA1_c35020	0.90	+0.2
3,676,533	+				-0.3
3,676,579	+				-0.0
3,676,625	+				-0.2
3,676,635	-				-0.2
3,676,639	+				-0.1
3,676,639	+				-0.7
3,676,647	-				-0.9
3,676,701	-				-3.1
3,676,712	+				-0.1
3,676,757	+				-0.9
3,676,824	-		PGA1_c35030	0.11	-0.2
3,676,828	-		PGA1_c35030	0.12	-0.3
3,676,840	+		PGA1_c35030	0.13	+1.0
3,676,847	+		PGA1_c35030	0.14	-3.3
3,676,855	-		PGA1_c35030	0.16	-0.1
3,676,855	-		PGA1_c35030	0.16	-1.4
3,676,855	-		PGA1_c35030	0.16	-0.9
3,676,868	+		PGA1_c35030	0.17	-1.2
3,676,876	-		PGA1_c35030	0.18	+0.3
3,676,901	+		PGA1_c35030	0.22	-0.0
3,676,927	+		PGA1_c35030	0.26	-1.5
3,677,054	+		PGA1_c35030	0.43	-1.1
3,677,103	+		PGA1_c35030	0.50	-0.9
3,677,156	+		PGA1_c35030	0.58	+0.2
3,677,198	-		PGA1_c35030	0.64	-0.9
3,677,208	+		PGA1_c35030	0.65	-3.0
3,677,208	+		PGA1_c35030	0.65	-3.8
3,677,243	+		PGA1_c35030	0.70	+0.8
3,677,251	-		PGA1_c35030	0.71	-1.1
3,677,251	-		PGA1_c35030	0.71	+1.5
3,677,257	+		PGA1_c35030	0.72	-0.8
3,677,329	-		PGA1_c35030	0.82	-2.7
3,677,334	-		PGA1_c35030	0.83	-0.6
3,677,349	-		PGA1_c35030	0.85	-1.3
3,677,349	-		PGA1_c35030	0.85	-1.9
3,677,349	-		PGA1_c35030	0.85	-1.3
3,677,368	-		PGA1_c35030	0.87	-0.5
3,677,372	+		PGA1_c35030	0.88	+0.2
3,677,388	+				+1.0
3,677,436	+				+1.3
3,677,439	+				-0.1
3,677,444	-				-1.1
3,677,496	+				+0.7
3,677,498	+				+0.6
3,677,504	+				+0.9
3,677,578	+		PGA1_c35040	0.20	+1.0
3,677,720	+		PGA1_c35040	0.43	+0.5
3,677,769	+		PGA1_c35040	0.51	+0.5
3,677,769	+		PGA1_c35040	0.51	+1.3
3,677,769	+		PGA1_c35040	0.51	+0.5
3,677,815	+		PGA1_c35040	0.59	-0.1
3,677,855	-		PGA1_c35040	0.65	+2.7
3,677,866	+		PGA1_c35040	0.67	+0.5
3,677,874	-		PGA1_c35040	0.68	-0.8
3,677,906	+		PGA1_c35040	0.73	-0.3
3,677,914	-		PGA1_c35040	0.75	-0.4
3,677,959	-		PGA1_c35040	0.82	+0.6
3,677,965	+		PGA1_c35040	0.83	-1.3
3,677,970	+		PGA1_c35040	0.84	+1.5
3,677,970	+		PGA1_c35040	0.84	+0.1
3,677,970	+		PGA1_c35040	0.84	+0.1
3,677,970	+		PGA1_c35040	0.84	+0.1
3,677,970	+		PGA1_c35040	0.84	+2.0
3,677,970	+		PGA1_c35040	0.84	+2.4
3,677,970	+		PGA1_c35040	0.84	-2.6
3,677,970	+		PGA1_c35040	0.84	+1.2
3,677,970	+		PGA1_c35040	0.84	-0.0
3,677,970	+		PGA1_c35040	0.84	+2.2
3,677,973	-		PGA1_c35040	0.84	-2.3
3,677,973	-		PGA1_c35040	0.84	-1.4
3,677,978	-		PGA1_c35040	0.85	-0.1
3,677,978	-		PGA1_c35040	0.85	-2.6
3,677,978	-		PGA1_c35040	0.85	+0.1
3,677,978	-		PGA1_c35040	0.85	+1.1
3,677,978	-		PGA1_c35040	0.85	+0.2
3,677,978	-		PGA1_c35040	0.85	+0.1
3,677,978	-		PGA1_c35040	0.85	-0.5
3,677,978	-		PGA1_c35040	0.85	+0.4
3,677,978	-		PGA1_c35040	0.85	+0.4
3,677,978	-		PGA1_c35040	0.85	+0.7
3,678,083	+				-0.5
3,678,091	-				-0.9
3,678,107	-				+0.1
3,678,188	-		PGA1_c35050	0.11	-0.0
3,678,225	+		PGA1_c35050	0.14	-1.4
3,678,225	+		PGA1_c35050	0.14	+0.1
3,678,228	-		PGA1_c35050	0.14	+1.6
3,678,228	-		PGA1_c35050	0.14	+0.2
3,678,263	+		PGA1_c35050	0.17	-1.1
3,678,268	-		PGA1_c35050	0.18	+0.7
3,678,284	+		PGA1_c35050	0.19	+0.8
3,678,290	-		PGA1_c35050	0.20	+1.6
3,678,361	-		PGA1_c35050	0.26	-0.1
3,678,390	+		PGA1_c35050	0.28	+1.8