Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29950

Experiment: m.b. nitrite 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 6 mM
3,133,008	+				-1.8
3,133,018	+				+0.1
3,133,018	+				+0.3
3,133,018	+				-0.2
3,133,018	+				+0.4
3,133,018	+				-0.0
3,133,021	-				-0.7
3,133,026	-				+0.7
3,133,026	-				+0.2
3,133,026	-				-0.4
3,133,026	-				+1.6
3,133,036	-				+0.8
3,133,096	+				+0.8
3,133,096	+				-1.2
3,133,099	-				+1.5
3,133,099	-				-2.3
3,133,101	+				+1.5
3,133,101	+				-1.8
3,133,101	+				-0.1
3,133,101	+				-1.4
3,133,101	+				+0.4
3,133,101	+				+0.1
3,133,101	+				+0.9
3,133,101	+				+1.5
3,133,104	-				-1.8
3,133,104	-				-2.9
3,133,104	-				-2.5
3,133,109	-				+1.2
3,133,109	-				-0.4
3,133,109	-				-0.4
3,133,109	-				+0.2
3,133,109	-				+0.4
3,133,109	-				+1.0
3,133,109	-				+1.7
3,133,109	-				-1.8
3,133,109	-				+0.2
3,133,230	+		PGA1_c29960	0.16	+0.6
3,133,233	-		PGA1_c29960	0.17	+1.0
3,133,316	+		PGA1_c29960	0.27	-3.9
3,133,316	+		PGA1_c29960	0.27	+0.8
3,133,318	+		PGA1_c29960	0.27	-1.8
3,133,318	+		PGA1_c29960	0.27	-0.5
3,133,323	+		PGA1_c29960	0.27	+2.0
3,133,324	-		PGA1_c29960	0.28	-2.0
3,133,324	-		PGA1_c29960	0.28	+1.5
3,133,326	-		PGA1_c29960	0.28	+1.2
3,133,331	-		PGA1_c29960	0.28	+1.4
3,133,485	+		PGA1_c29960	0.47	-1.2
3,133,506	-		PGA1_c29960	0.49	+0.4
3,133,571	-		PGA1_c29960	0.57	-0.4
3,133,571	-		PGA1_c29960	0.57	-0.3
3,133,571	-		PGA1_c29960	0.57	+0.5
3,133,623	+		PGA1_c29960	0.63	-1.0
3,133,668	+		PGA1_c29960	0.68	+0.5
3,133,717	+		PGA1_c29960	0.74	+0.6
3,133,742	-		PGA1_c29960	0.77	-0.4
3,133,749	+		PGA1_c29960	0.78	+0.4
3,133,813	+		PGA1_c29960	0.86	-1.4
3,133,818	+		PGA1_c29960	0.86	+1.4
3,133,847	+		PGA1_c29960	0.90	+0.9
3,133,894	+				-3.2
3,133,902	-				+0.4
3,133,902	-				-0.0
3,133,944	-				+0.9
3,133,949	-				+0.2
3,133,949	-				+0.1
3,133,983	-				-0.4