Experiment: m.b. acetate 87.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2770 and HP15_2771 are separated by 0 nucleotides HP15_2771 and HP15_2772 are separated by 41 nucleotides HP15_2772 and HP15_2773 are separated by 14 nucleotides HP15_2773 and HP15_2774 are separated by 20 nucleotides
HP15_2770: HP15_2770 - permease for cytosine/purines uracil thiamine allantoin, at 2,923,117 to 2,924,400
_2770
HP15_2771: HP15_2771 - DNA-binding protein, at 2,924,401 to 2,925,024
_2771
HP15_2772: HP15_2772 - N-isopropylammelide isopropylaminohydrolase, at 2,925,066 to 2,926,310
_2772
HP15_2773: HP15_2773 - conserved hypothetical protein, membrane, at 2,926,325 to 2,926,780
_2773
HP15_2774: HP15_2774 - DSBA oxidoreductase, at 2,926,801 to 2,927,448
_2774
Position (kb)
2925
2926
2927 Strain fitness (log2 ratio)
-1
0
1
2 at 2924.085 kb on - strand, within HP15_2770 at 2924.206 kb on - strand, within HP15_2770 at 2924.213 kb on + strand, within HP15_2770 at 2924.283 kb on - strand at 2924.323 kb on + strand at 2924.331 kb on - strand at 2924.423 kb on + strand at 2924.423 kb on + strand at 2924.430 kb on - strand at 2924.430 kb on - strand at 2924.495 kb on + strand, within HP15_2771 at 2924.532 kb on + strand, within HP15_2771 at 2924.611 kb on - strand, within HP15_2771 at 2924.676 kb on + strand, within HP15_2771 at 2924.684 kb on + strand, within HP15_2771 at 2924.697 kb on + strand, within HP15_2771 at 2924.738 kb on - strand, within HP15_2771 at 2924.738 kb on - strand, within HP15_2771 at 2924.738 kb on - strand, within HP15_2771 at 2924.786 kb on + strand, within HP15_2771 at 2924.824 kb on - strand, within HP15_2771 at 2924.875 kb on + strand, within HP15_2771 at 2924.992 kb on + strand at 2925.398 kb on + strand, within HP15_2772 at 2925.423 kb on + strand, within HP15_2772 at 2925.431 kb on - strand, within HP15_2772 at 2925.460 kb on + strand, within HP15_2772 at 2925.580 kb on + strand, within HP15_2772 at 2925.616 kb on - strand, within HP15_2772 at 2925.623 kb on + strand, within HP15_2772 at 2925.631 kb on - strand, within HP15_2772 at 2925.691 kb on - strand, within HP15_2772 at 2925.787 kb on + strand, within HP15_2772 at 2926.035 kb on + strand, within HP15_2772 at 2926.074 kb on - strand, within HP15_2772 at 2926.146 kb on - strand, within HP15_2772 at 2926.146 kb on - strand, within HP15_2772 at 2926.241 kb on - strand at 2926.285 kb on - strand at 2926.305 kb on - strand at 2926.316 kb on + strand at 2926.474 kb on - strand, within HP15_2773 at 2926.493 kb on + strand, within HP15_2773 at 2926.499 kb on + strand, within HP15_2773 at 2926.621 kb on + strand, within HP15_2773 at 2926.724 kb on + strand, within HP15_2773 at 2926.802 kb on + strand at 2926.872 kb on + strand, within HP15_2774 at 2926.913 kb on - strand, within HP15_2774 at 2926.988 kb on - strand, within HP15_2774 at 2927.015 kb on + strand, within HP15_2774 at 2927.028 kb on - strand, within HP15_2774 at 2927.107 kb on - strand, within HP15_2774 at 2927.107 kb on - strand, within HP15_2774 at 2927.109 kb on + strand, within HP15_2774 at 2927.241 kb on - strand, within HP15_2774 at 2927.281 kb on + strand, within HP15_2774 at 2927.301 kb on + strand, within HP15_2774
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. acetate 87.5 mM remove 2,924,085 - HP15_2770 0.75 -0.5 2,924,206 - HP15_2770 0.85 -0.0 2,924,213 + HP15_2770 0.85 +2.4 2,924,283 - +0.8 2,924,323 + -0.7 2,924,331 - -0.4 2,924,423 + -0.3 2,924,423 + -0.4 2,924,430 - +0.9 2,924,430 - +0.6 2,924,495 + HP15_2771 0.15 -0.4 2,924,532 + HP15_2771 0.21 -0.1 2,924,611 - HP15_2771 0.34 -0.4 2,924,676 + HP15_2771 0.44 +1.0 2,924,684 + HP15_2771 0.45 -0.3 2,924,697 + HP15_2771 0.47 +0.6 2,924,738 - HP15_2771 0.54 -0.6 2,924,738 - HP15_2771 0.54 -0.5 2,924,738 - HP15_2771 0.54 +0.5 2,924,786 + HP15_2771 0.62 +0.8 2,924,824 - HP15_2771 0.68 -0.7 2,924,875 + HP15_2771 0.76 +0.9 2,924,992 + +0.6 2,925,398 + HP15_2772 0.27 +0.7 2,925,423 + HP15_2772 0.29 -0.2 2,925,431 - HP15_2772 0.29 -0.3 2,925,460 + HP15_2772 0.32 -1.0 2,925,580 + HP15_2772 0.41 -0.7 2,925,616 - HP15_2772 0.44 +1.0 2,925,623 + HP15_2772 0.45 -0.4 2,925,631 - HP15_2772 0.45 -0.0 2,925,691 - HP15_2772 0.50 -0.3 2,925,787 + HP15_2772 0.58 -0.2 2,926,035 + HP15_2772 0.78 -0.9 2,926,074 - HP15_2772 0.81 -0.9 2,926,146 - HP15_2772 0.87 -0.3 2,926,146 - HP15_2772 0.87 -0.0 2,926,241 - +1.0 2,926,285 - -0.5 2,926,305 - -0.2 2,926,316 + -0.2 2,926,474 - HP15_2773 0.33 -0.2 2,926,493 + HP15_2773 0.37 +0.1 2,926,499 + HP15_2773 0.38 +0.9 2,926,621 + HP15_2773 0.65 +0.6 2,926,724 + HP15_2773 0.88 -0.7 2,926,802 + +0.9 2,926,872 + HP15_2774 0.11 +0.3 2,926,913 - HP15_2774 0.17 -1.6 2,926,988 - HP15_2774 0.29 -1.0 2,927,015 + HP15_2774 0.33 -0.2 2,927,028 - HP15_2774 0.35 +0.1 2,927,107 - HP15_2774 0.47 +0.1 2,927,107 - HP15_2774 0.47 -0.3 2,927,109 + HP15_2774 0.48 +0.1 2,927,241 - HP15_2774 0.68 +0.4 2,927,281 + HP15_2774 0.74 +0.9 2,927,301 + HP15_2774 0.77 -0.6
Or see this region's nucleotide sequence