Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c26990

Experiment: m.b. nitrite 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 6 mM
2,815,146	-		PGA1_c26970	0.82	-1.5
2,815,154	+		PGA1_c26970	0.83	-2.7
2,815,241	-		PGA1_c26970	0.89	+0.5
2,815,264	-				+1.1
2,815,300	+				+0.1
2,815,308	-				+0.2
2,815,322	+				-2.2
2,815,399	+				-2.9
2,815,400	+				+0.8
2,815,408	-				-1.7
2,815,415	+				-0.4
2,815,415	+				-1.4
2,815,418	-				+3.2
2,815,420	+				+0.6
2,815,423	-				-2.2
2,815,485	-				+0.6
2,815,555	+		PGA1_c26980	0.23	+0.5
2,815,556	+		PGA1_c26980	0.24	-1.1
2,815,563	-		PGA1_c26980	0.27	+0.8
2,815,591	+		PGA1_c26980	0.37	-0.6
2,815,600	-		PGA1_c26980	0.41	-1.0
2,815,740	-				-1.2
2,815,740	-				+0.0
2,815,755	+				+0.0
2,815,755	+				+0.9
2,815,755	+				-0.2
2,815,760	+				-0.5
2,815,768	-				+0.5
2,815,768	-				-2.5
2,815,768	-				+2.1
2,815,771	+				+0.8
2,815,773	+				+1.7
2,815,773	+				-2.4
2,815,775	+				-0.8
2,815,779	-				-0.2
2,815,779	-				+1.4
2,815,781	-				-0.4
2,815,838	+				-2.2
2,815,846	+				-0.2
2,815,846	-				-0.7
2,815,851	-				+2.1
2,815,922	+				+0.9
2,815,922	+				-0.4
2,815,922	+				-2.2
2,815,922	+				+1.0
2,815,927	+				-1.6
2,815,930	-				-0.1
2,815,935	-				-0.2
2,815,993	-				-1.4
2,816,104	-				-1.1
2,816,104	-				+0.7
2,816,144	+		PGA1_c26990	0.10	-1.0
2,816,145	-		PGA1_c26990	0.10	-1.6
2,816,145	-		PGA1_c26990	0.10	-1.0
2,816,187	-		PGA1_c26990	0.19	+1.2
2,816,187	-		PGA1_c26990	0.19	-0.7
2,816,204	+		PGA1_c26990	0.22	+0.9
2,816,231	+		PGA1_c26990	0.27	-1.7
2,816,239	-		PGA1_c26990	0.29	+0.7
2,816,241	-		PGA1_c26990	0.29	+1.7
2,816,247	+		PGA1_c26990	0.30	-0.5
2,816,248	-		PGA1_c26990	0.31	+1.1
2,816,255	-		PGA1_c26990	0.32	-1.1
2,816,255	-		PGA1_c26990	0.32	+1.4
2,816,283	-		PGA1_c26990	0.37	+1.1
2,816,361	-		PGA1_c26990	0.53	+2.7
2,816,370	-		PGA1_c26990	0.55	-0.4
2,816,388	+		PGA1_c26990	0.58	+0.6
2,816,391	-		PGA1_c26990	0.59	-0.5
2,816,396	-		PGA1_c26990	0.60	+0.6
2,816,456	+		PGA1_c26990	0.71	-0.9
2,816,523	+		PGA1_c26990	0.85	+1.3
2,816,531	-		PGA1_c26990	0.86	+1.5
2,816,531	-		PGA1_c26990	0.86	+0.8
2,816,531	-		PGA1_c26990	0.86	+0.4
2,816,531	-		PGA1_c26990	0.86	-0.5
2,816,555	-				-2.5
2,816,592	+				+1.8
2,816,600	-				-0.2
2,816,611	-				+0.8
2,816,634	+				+2.5
2,816,634	+				+1.2
2,816,642	-				-1.5
2,816,643	-				+2.0
2,816,689	-				+0.4
2,816,713	+				+0.6
2,816,767	-		PGA1_c27000	0.26	+0.2
2,816,813	+		PGA1_c27000	0.49	+0.4
2,816,813	+		PGA1_c27000	0.49	-0.7
2,816,813	+		PGA1_c27000	0.49	+0.1
2,816,818	+		PGA1_c27000	0.52	+1.1
2,816,872	+		PGA1_c27000	0.79	+3.4
2,816,880	-		PGA1_c27000	0.83	+1.4
2,816,884	+		PGA1_c27000	0.85	+1.1
2,816,904	-				+0.5
2,816,917	-				+0.1
2,816,949	-				+2.3
2,817,061	-				+2.1
2,817,102	-				+0.9
2,817,113	+				-1.5
2,817,134	+				+0.5
2,817,147	+				-0.2
2,817,155	-				+0.9
2,817,156	+				-1.5
2,817,164	-				+1.1
2,817,174	-				-2.1
2,817,245	+		PGA1_c27010	0.21	-3.0
2,817,256	+		PGA1_c27010	0.23	+0.2
2,817,258	-		PGA1_c27010	0.23	+0.7
2,817,258	-		PGA1_c27010	0.23	+0.5
2,817,321	+		PGA1_c27010	0.35	-2.2
2,817,382	+		PGA1_c27010	0.46	+0.5
2,817,552	+		PGA1_c27010	0.76	-0.8
2,817,555	-		PGA1_c27010	0.77	+1.1
2,817,562	-		PGA1_c27010	0.78	-0.1
2,817,575	+		PGA1_c27010	0.81	+0.9
2,817,580	+		PGA1_c27010	0.81	+2.2