Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c15680

Experiment: m.b. nitrite 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 6 mM
1,627,406	+		PGA1_c15670	0.27	-3.9
1,627,406	+		PGA1_c15670	0.27	+0.8
1,627,406	+		PGA1_c15670	0.27	-0.7
1,627,406	+		PGA1_c15670	0.27	+0.4
1,627,406	+		PGA1_c15670	0.27	+0.8
1,627,414	-		PGA1_c15670	0.28	-0.3
1,627,414	-		PGA1_c15670	0.28	+1.2
1,627,414	-		PGA1_c15670	0.28	+0.5
1,627,414	-		PGA1_c15670	0.28	-2.1
1,627,414	-		PGA1_c15670	0.28	-0.7
1,627,414	-		PGA1_c15670	0.28	-1.0
1,627,414	-		PGA1_c15670	0.28	-0.2
1,627,414	-		PGA1_c15670	0.28	-0.3
1,627,414	-		PGA1_c15670	0.28	+0.3
1,627,414	-		PGA1_c15670	0.28	+0.4
1,627,414	-		PGA1_c15670	0.28	-1.8
1,627,414	-		PGA1_c15670	0.28	+0.8
1,627,415	-		PGA1_c15670	0.28	+0.4
1,627,440	-		PGA1_c15670	0.30	-1.4
1,627,448	-		PGA1_c15670	0.30	-1.6
1,627,453	+		PGA1_c15670	0.31	-0.5
1,627,453	+		PGA1_c15670	0.31	+0.3
1,627,471	-		PGA1_c15670	0.32	-0.6
1,627,490	+		PGA1_c15670	0.34	-0.2
1,627,543	-		PGA1_c15670	0.38	+0.1
1,627,601	-		PGA1_c15670	0.43	+0.2
1,627,698	-		PGA1_c15670	0.51	-0.8
1,627,765	+		PGA1_c15670	0.57	-1.2
1,627,862	-		PGA1_c15670	0.65	-0.1
1,627,862	-		PGA1_c15670	0.65	-0.6
1,627,882	-		PGA1_c15670	0.66	-0.3
1,627,965	+		PGA1_c15670	0.73	-0.7
1,628,052	-		PGA1_c15670	0.80	+0.6
1,628,081	-		PGA1_c15670	0.83	-1.7
1,628,139	+		PGA1_c15670	0.87	-1.8
1,628,160	+		PGA1_c15670	0.89	+0.2
1,628,166	+		PGA1_c15670	0.90	-0.1
1,628,168	-		PGA1_c15670	0.90	-0.1
1,628,184	-				+0.5
1,628,226	-				+2.2
1,628,236	-				+1.6
1,628,236	-				-0.0
1,628,470	+		PGA1_c15680	0.12	+0.2
1,628,505	-		PGA1_c15680	0.16	+1.4
1,628,522	+		PGA1_c15680	0.18	-1.5
1,628,522	+		PGA1_c15680	0.18	-0.8
1,628,530	-		PGA1_c15680	0.19	-0.5
1,628,540	-		PGA1_c15680	0.20	-2.5
1,629,051	+		PGA1_c15680	0.79	-1.0
1,629,070	+		PGA1_c15680	0.81	+0.4
1,629,192	+				+0.5
1,629,197	+				+1.0
1,629,253	-				+0.2
1,629,253	-				+0.1
1,629,321	-				+1.6
1,629,347	+				+1.3
1,629,355	-		PGA1_c15690	0.10	-3.6
1,629,373	+		PGA1_c15690	0.12	-1.4
1,629,373	-		PGA1_c15690	0.12	+1.3
1,629,421	-		PGA1_c15690	0.19	+0.7
1,629,422	-		PGA1_c15690	0.19	+0.6
1,629,475	+		PGA1_c15690	0.26	-1.9
1,629,600	+		PGA1_c15690	0.42	-0.7
1,629,608	-		PGA1_c15690	0.43	-0.8
1,629,614	+		PGA1_c15690	0.44	+0.9
1,629,632	-		PGA1_c15690	0.46	-0.5
1,629,715	-		PGA1_c15690	0.57	-0.3
1,629,733	-		PGA1_c15690	0.59	-0.5
1,629,763	+		PGA1_c15690	0.63	+0.5
1,629,771	-		PGA1_c15690	0.64	-1.9
1,629,852	-		PGA1_c15690	0.74	-0.2
1,629,873	-		PGA1_c15690	0.77	-2.1
1,629,884	+		PGA1_c15690	0.78	-0.8
1,629,892	-		PGA1_c15690	0.79	+0.1
1,629,921	-		PGA1_c15690	0.83	+0.1
1,629,929	+		PGA1_c15690	0.84	-1.7
1,629,934	+		PGA1_c15690	0.85	+0.4
1,629,997	+				+4.0
1,630,072	-				+0.4
1,630,096	+				+0.4
1,630,096	+				+0.3
1,630,096	+				-0.9
1,630,096	+				+0.3
1,630,096	+				-0.5
1,630,104	-				+3.2
1,630,104	-				+0.2
1,630,104	-				-0.4
1,630,104	-				-2.1
1,630,104	-				-0.3
1,630,104	-				-1.0
1,630,104	-				-0.9
1,630,104	-				-2.1
1,630,104	-				-2.4
1,630,104	-				+1.1
1,630,104	-				-1.7
1,630,136	+				+0.7