Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14260
Experiment: m.b. nitrite 6 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. nitrite 6 mM |
---|---|---|---|---|---|
remove | |||||
1,480,388 | + | -1.2 | |||
1,480,393 | + | +0.1 | |||
1,480,802 | + | PGA1_c14260 | 0.30 | -1.2 | |
1,480,967 | - | PGA1_c14260 | 0.42 | -1.7 | |
1,481,237 | + | PGA1_c14260 | 0.62 | -0.9 | |
1,481,401 | + | PGA1_c14260 | 0.74 | +0.1 | |
1,481,401 | + | PGA1_c14260 | 0.74 | -2.4 | |
1,481,401 | + | PGA1_c14260 | 0.74 | +0.1 | |
1,481,401 | + | PGA1_c14260 | 0.74 | -0.9 | |
1,481,646 | + | -1.3 | |||
1,481,771 | + | +0.5 | |||
1,481,779 | - | -1.0 | |||
1,481,779 | - | -2.7 | |||
1,481,786 | + | +0.1 | |||
1,481,786 | + | -2.9 | |||
1,481,786 | + | -0.2 | |||
1,481,786 | + | -2.6 | |||
1,481,786 | + | -1.4 | |||
1,481,794 | - | -0.3 | |||
1,481,794 | - | -1.2 | |||
1,481,874 | + | -3.0 | |||
1,481,938 | + | PGA1_c14270 | 0.20 | +0.4 | |
1,481,945 | + | PGA1_c14270 | 0.23 | -0.4 | |
1,481,947 | + | PGA1_c14270 | 0.23 | -0.6 | |
1,481,948 | - | PGA1_c14270 | 0.23 | +0.4 | |
1,482,018 | - | PGA1_c14270 | 0.45 | -2.9 |
Or see this region's nucleotide sequence