Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12440

Experiment: m.b. nitrite 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 6 mM
1,290,432	+				+0.6
1,290,609	+		PGA1_c12420	0.40	-0.2
1,290,609	+		PGA1_c12420	0.40	+0.9
1,290,617	-		PGA1_c12420	0.42	+0.2
1,290,617	-		PGA1_c12420	0.42	+1.6
1,290,652	+		PGA1_c12420	0.49	+0.2
1,290,693	+		PGA1_c12420	0.57	-0.1
1,290,706	-		PGA1_c12420	0.60	-1.1
1,290,708	+		PGA1_c12420	0.61	+1.6
1,290,716	-		PGA1_c12420	0.62	+0.9
1,290,749	-		PGA1_c12420	0.69	+0.9
1,290,749	-		PGA1_c12420	0.69	-0.7
1,290,756	+		PGA1_c12420	0.71	+0.3
1,290,760	+		PGA1_c12420	0.71	-0.0
1,290,763	-		PGA1_c12420	0.72	-1.1
1,290,774	+		PGA1_c12420	0.74	-3.0
1,290,813	+		PGA1_c12420	0.83	+0.1
1,290,840	-		PGA1_c12420	0.88	+0.6
1,290,875	-				+1.0
1,290,880	+				-0.0
1,290,904	+				-3.2
1,290,929	+				-0.7
1,290,937	-				-1.5
1,290,944	+				+0.1
1,290,977	-				-0.4
1,290,983	-				+0.1
1,291,009	+		PGA1_c12430	0.15	-0.0
1,291,009	+		PGA1_c12430	0.15	+1.0
1,291,083	+		PGA1_c12430	0.33	-1.7
1,291,083	+		PGA1_c12430	0.33	+1.1
1,291,095	-		PGA1_c12430	0.35	+1.0
1,291,180	+		PGA1_c12430	0.56	+0.1
1,291,241	+		PGA1_c12430	0.71	+0.8
1,291,260	-		PGA1_c12430	0.75	+0.2
1,291,281	-		PGA1_c12430	0.80	-0.1
1,291,288	+		PGA1_c12430	0.82	-0.5
1,291,389	-				+1.0
1,291,404	-				-2.0
1,291,431	-				+1.2
1,291,467	-		PGA1_c12440	0.16	+0.1
1,291,604	-		PGA1_c12440	0.58	+0.8
1,291,606	+		PGA1_c12440	0.58	+2.1
1,291,707	+		PGA1_c12440	0.89	+0.3
1,291,714	-				-3.2
1,291,716	+				+0.5
1,291,731	+				+0.3
1,291,737	+				+1.2
1,291,746	-				-0.2
1,291,760	+				-0.1
1,291,805	-				-0.9
1,291,934	-		PGA1_c12450	0.14	-0.1
1,291,943	-		PGA1_c12450	0.15	+0.9
1,292,011	-		PGA1_c12450	0.23	-1.3
1,292,083	+		PGA1_c12450	0.31	+0.1
1,292,083	+		PGA1_c12450	0.31	+0.4
1,292,083	-		PGA1_c12450	0.31	-1.6
1,292,136	+		PGA1_c12450	0.38	-0.3
1,292,136	-		PGA1_c12450	0.38	-3.8
1,292,136	-		PGA1_c12450	0.38	-1.2
1,292,162	+		PGA1_c12450	0.41	-1.5
1,292,185	+		PGA1_c12450	0.43	+0.1
1,292,185	+		PGA1_c12450	0.43	-0.9
1,292,193	-		PGA1_c12450	0.44	-0.4
1,292,193	-		PGA1_c12450	0.44	+0.6
1,292,230	-		PGA1_c12450	0.49	-0.8
1,292,379	-		PGA1_c12450	0.66	+0.5
1,292,445	-		PGA1_c12450	0.74	-0.5
1,292,453	-		PGA1_c12450	0.75	-0.2
1,292,514	+		PGA1_c12450	0.82	-2.5
1,292,535	+		PGA1_c12450	0.84	+0.5
1,292,535	+		PGA1_c12450	0.84	-0.5
1,292,535	+		PGA1_c12450	0.84	-0.1
1,292,566	-		PGA1_c12450	0.88	+0.3