Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12400

Experiment: m.b. nitrite 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 6 mM
1,287,868	+		PGA1_c12380	0.24	+2.8
1,287,886	+		PGA1_c12380	0.29	-2.4
1,287,891	+		PGA1_c12380	0.30	+2.4
1,287,899	-		PGA1_c12380	0.33	+2.0
1,287,941	+		PGA1_c12380	0.45	+1.6
1,288,019	+		PGA1_c12380	0.68	+1.3
1,288,027	-		PGA1_c12380	0.71	+2.1
1,288,027	-		PGA1_c12380	0.71	-0.4
1,288,027	-		PGA1_c12380	0.71	-1.5
1,288,027	-		PGA1_c12380	0.71	+1.3
1,288,065	+		PGA1_c12380	0.82	-0.7
1,288,139	-				+1.0
1,288,139	-				+0.5
1,288,176	+				+0.6
1,288,176	+				-0.2
1,288,230	+		PGA1_c12390	0.18	-2.5
1,288,271	-		PGA1_c12390	0.27	+1.2
1,288,281	-		PGA1_c12390	0.29	+0.6
1,288,599	-				+0.1
1,288,607	-				+1.0
1,288,701	-				-2.4
1,288,749	+				-0.3
1,288,815	+				-1.1
1,288,823	-				-0.4
1,288,851	+				-0.3
1,288,859	-				+0.9
1,288,859	-				+2.1
1,288,877	+				+0.4
1,288,909	+				-1.7
1,288,915	+				-1.2
1,288,949	+		PGA1_c12400	0.12	-0.5
1,288,965	+		PGA1_c12400	0.14	+2.3
1,289,004	-		PGA1_c12400	0.20	+0.1
1,289,070	+		PGA1_c12400	0.28	+0.4
1,289,078	-		PGA1_c12400	0.30	-0.7
1,289,190	-		PGA1_c12400	0.45	-1.0
1,289,201	+		PGA1_c12400	0.46	+2.0
1,289,204	-		PGA1_c12400	0.47	-1.9
1,289,238	+		PGA1_c12400	0.51	+1.1
1,289,246	-		PGA1_c12400	0.52	-1.7
1,289,264	-		PGA1_c12400	0.55	+1.9
1,289,271	-		PGA1_c12400	0.56	+1.6
1,289,354	-		PGA1_c12400	0.67	+1.9
1,289,378	+		PGA1_c12400	0.70	+2.0
1,289,386	-		PGA1_c12400	0.71	+0.4
1,289,466	+		PGA1_c12400	0.82	-0.9
1,289,476	+		PGA1_c12400	0.83	+1.0
1,289,591	+				-2.6
1,289,619	+				+1.8
1,289,627	-				+1.4
1,289,672	-				+1.8
1,289,697	-				+1.3
1,289,734	-		PGA1_c12410	0.15	+0.8
1,289,753	+		PGA1_c12410	0.19	-2.6
1,289,772	+		PGA1_c12410	0.22	+1.1
1,289,772	+		PGA1_c12410	0.22	+0.9
1,289,773	+		PGA1_c12410	0.22	+0.9
1,289,780	-		PGA1_c12410	0.23	-2.8
1,289,783	+		PGA1_c12410	0.24	-0.0
1,289,791	-		PGA1_c12410	0.25	+0.5
1,289,882	-		PGA1_c12410	0.41	-0.0
1,289,903	+		PGA1_c12410	0.45	-0.5
1,290,013	-		PGA1_c12410	0.64	-0.7
1,290,023	-		PGA1_c12410	0.65	+0.3
1,290,031	+		PGA1_c12410	0.67	+0.1
1,290,106	+		PGA1_c12410	0.80	+0.3
1,290,224	-				-0.1
1,290,256	+				+0.5
1,290,300	-				+0.1
1,290,359	-				-0.1
1,290,359	-				+0.7
1,290,365	+				-2.3
1,290,365	+				+1.7
1,290,373	-				-3.2
1,290,385	+				-1.8
1,290,385	+				-0.3
1,290,385	+				+0.5
1,290,432	+				+0.6