Experiment: m.b. acetate 175 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_453 and HP15_454 are separated by 61 nucleotides HP15_454 and HP15_455 overlap by 1 nucleotides HP15_455 and HP15_456 are separated by 202 nucleotides
HP15_453: HP15_453 - thiamine biosynthesis protein thiC, at 457,555 to 459,450
_453
HP15_454: HP15_454 - nucleoside diphosphate pyrophosphatase, at 459,512 to 460,129
_454
HP15_455: HP15_455 - protein containing DUF1249, at 460,129 to 460,614
_455
HP15_456: HP15_456 - phosphohydrolase, at 460,817 to 461,623
_456
Position (kb) 460
461 Strain fitness (log2 ratio) -2
-1
0
1 at 459.601 kb on - strand, within HP15_454 at 459.606 kb on - strand, within HP15_454 at 459.649 kb on - strand, within HP15_454 at 459.678 kb on + strand, within HP15_454 at 459.678 kb on + strand, within HP15_454 at 459.681 kb on + strand, within HP15_454 at 459.711 kb on + strand, within HP15_454 at 459.714 kb on - strand, within HP15_454 at 459.719 kb on - strand, within HP15_454 at 459.738 kb on - strand, within HP15_454 at 459.738 kb on - strand, within HP15_454 at 459.751 kb on - strand, within HP15_454 at 459.802 kb on - strand, within HP15_454 at 459.855 kb on - strand, within HP15_454 at 459.933 kb on - strand, within HP15_454 at 459.991 kb on + strand, within HP15_454 at 460.084 kb on - strand at 460.086 kb on + strand at 460.179 kb on + strand, within HP15_455 at 460.187 kb on - strand, within HP15_455 at 460.637 kb on - strand at 460.701 kb on + strand at 460.710 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. acetate 175 mM remove 459,601 - HP15_454 0.14 -0.3 459,606 - HP15_454 0.15 -0.4 459,649 - HP15_454 0.22 -0.3 459,678 + HP15_454 0.27 +0.9 459,678 + HP15_454 0.27 -0.8 459,681 + HP15_454 0.27 +1.0 459,711 + HP15_454 0.32 +1.6 459,714 - HP15_454 0.33 -0.6 459,719 - HP15_454 0.33 -0.2 459,738 - HP15_454 0.37 +0.7 459,738 - HP15_454 0.37 -0.3 459,751 - HP15_454 0.39 -0.4 459,802 - HP15_454 0.47 -0.5 459,855 - HP15_454 0.56 -1.8 459,933 - HP15_454 0.68 -0.9 459,991 + HP15_454 0.78 +0.4 460,084 - +0.4 460,086 + -0.2 460,179 + HP15_455 0.10 +0.6 460,187 - HP15_455 0.12 -0.4 460,637 - -0.1 460,701 + +0.2 460,710 - -0.9
Or see this region's nucleotide sequence