Strain Fitness in Marinobacter adhaerens HP15 around HP15_1209

Experiment: m.b. acetate 175 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_tRNA19 and HP15_1209 are separated by 129 nucleotidesHP15_1209 and HP15_1210 overlap by 14 nucleotidesHP15_1210 and HP15_1211 are separated by 5 nucleotides HP15_tRNA19: HP15_tRNA19 - tRNA-Arg, at 1,255,238 to 1,255,314 _tRNA19 HP15_1209: HP15_1209 - glycosyltransferase involved in cell wall biogenesis, at 1,255,444 to 1,256,109 _1209 HP15_1210: HP15_1210 - conserved hypothetical protein, at 1,256,096 to 1,256,728 _1210 HP15_1211: HP15_1211 - protease III precursor, at 1,256,734 to 1,259,556 _1211 Position (kb) 1255 1256 1257Strain fitness (log2 ratio) -1 0 1at 1254.448 kb on - strandat 1254.601 kb on + strandat 1254.663 kb on + strandat 1254.762 kb on - strandat 1254.873 kb on + strandat 1254.936 kb on - strandat 1255.010 kb on + strandat 1255.058 kb on - strandat 1255.070 kb on - strandat 1255.173 kb on - strandat 1255.235 kb on + strandat 1255.372 kb on - strandat 1255.395 kb on - strandat 1255.552 kb on - strand, within HP15_1209at 1255.644 kb on + strand, within HP15_1209at 1255.692 kb on - strand, within HP15_1209at 1255.946 kb on + strand, within HP15_1209at 1256.146 kb on + strandat 1256.245 kb on + strand, within HP15_1210at 1256.332 kb on + strand, within HP15_1210at 1256.358 kb on + strand, within HP15_1210at 1256.366 kb on - strand, within HP15_1210at 1256.422 kb on - strand, within HP15_1210at 1256.516 kb on + strand, within HP15_1210at 1256.602 kb on - strand, within HP15_1210at 1256.693 kb on + strandat 1256.729 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. acetate 175 mM
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1,254,448 - -1.6
1,254,601 + -0.3
1,254,663 + +0.1
1,254,762 - -0.9
1,254,873 + +0.0
1,254,936 - -0.5
1,255,010 + +0.9
1,255,058 - -0.5
1,255,070 - +0.1
1,255,173 - -0.7
1,255,235 + +0.4
1,255,372 - -0.4
1,255,395 - -0.3
1,255,552 - HP15_1209 0.16 +0.6
1,255,644 + HP15_1209 0.30 +0.3
1,255,692 - HP15_1209 0.37 +0.1
1,255,946 + HP15_1209 0.75 -0.1
1,256,146 + +0.5
1,256,245 + HP15_1210 0.24 -0.3
1,256,332 + HP15_1210 0.37 -1.1
1,256,358 + HP15_1210 0.41 -0.7
1,256,366 - HP15_1210 0.43 -0.0
1,256,422 - HP15_1210 0.52 -0.5
1,256,516 + HP15_1210 0.66 +0.2
1,256,602 - HP15_1210 0.80 +0.1
1,256,693 + +0.5
1,256,729 - +1.0

Or see this region's nucleotide sequence