Strain Fitness in Shewanella amazonensis SB2B around Sama_2927

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
3,480,569	+		Sama_2925	0.46	-0.5
3,480,569	+		Sama_2925	0.46	+0.6
3,480,569	+		Sama_2925	0.46	-1.4
3,480,569	+		Sama_2925	0.46	-0.9
3,480,569	+		Sama_2925	0.46	+1.4
3,480,569	+		Sama_2925	0.46	+1.4
3,480,569	+		Sama_2925	0.46	+1.4
3,480,569	+		Sama_2925	0.46	+0.4
3,480,569	+		Sama_2925	0.46	-0.2
3,480,570	-		Sama_2925	0.46	-0.1
3,480,570	-		Sama_2925	0.46	-0.3
3,480,605	+		Sama_2925	0.54	-0.6
3,480,605	+		Sama_2925	0.54	+0.1
3,480,605	+		Sama_2925	0.54	-2.8
3,480,606	-		Sama_2925	0.55	-2.4
3,480,628	+		Sama_2925	0.60	-1.3
3,480,629	-		Sama_2925	0.60	-1.8
3,480,629	-		Sama_2925	0.60	-0.7
3,480,680	+		Sama_2925	0.72	+1.0
3,480,681	-		Sama_2925	0.72	-1.0
3,480,681	-		Sama_2925	0.72	-1.1
3,480,685	+		Sama_2925	0.73	+0.6
3,480,686	-		Sama_2925	0.74	+1.1
3,480,686	-		Sama_2925	0.74	+0.1
3,480,686	-		Sama_2925	0.74	+0.2
3,480,686	-		Sama_2925	0.74	-2.2
3,480,735	+		Sama_2925	0.85	-2.4
3,480,735	+		Sama_2925	0.85	-0.6
3,480,744	+		Sama_2925	0.87	-1.2
3,480,744	+		Sama_2925	0.87	+0.3
3,480,745	-		Sama_2925	0.88	-1.4
3,480,745	-		Sama_2925	0.88	+0.2
3,480,745	-		Sama_2925	0.88	-1.8
3,480,745	-		Sama_2925	0.88	-2.8
3,480,846	+				-1.2
3,480,846	+				-2.5
3,480,848	+				-1.8
3,481,017	-		Sama_2926	0.25	+0.0
3,481,055	-		Sama_2926	0.30	+0.2
3,481,055	-		Sama_2926	0.30	-0.9
3,481,161	-		Sama_2926	0.46	-1.1
3,481,161	-		Sama_2926	0.46	+0.3
3,481,297	-		Sama_2926	0.66	+0.9
3,481,356	+		Sama_2926	0.74	+0.9
3,481,365	+		Sama_2926	0.75	-2.3
3,481,366	-		Sama_2926	0.76	-1.8
3,481,366	-		Sama_2926	0.76	-2.3
3,481,366	-		Sama_2926	0.76	-0.4
3,481,406	-		Sama_2926	0.81	-1.5
3,481,406	-		Sama_2926	0.81	-1.3
3,481,412	+		Sama_2926	0.82	-1.2
3,481,447	-		Sama_2926	0.87	-1.6
3,481,447	-		Sama_2926	0.87	-0.4
3,481,447	-		Sama_2926	0.87	-0.4
3,481,461	+		Sama_2926	0.89	-2.4
3,481,461	+		Sama_2926	0.89	-0.5
3,481,461	+		Sama_2926	0.89	-0.0
3,481,482	+				-0.9
3,481,502	+				-1.6
3,481,503	-				+0.1
3,481,503	-				+0.6
3,481,503	-				+0.1
3,481,526	-				-0.4
3,481,526	-				-2.5
3,481,535	+				+0.4
3,481,535	+				-2.1
3,481,536	-				+0.0
3,481,536	-				+0.5
3,481,536	-				-0.4
3,481,536	-				-1.0
3,481,581	+		Sama_2927	0.11	-2.2
3,481,581	+		Sama_2927	0.11	-1.6
3,481,581	+		Sama_2927	0.11	-1.3
3,481,582	-		Sama_2927	0.11	-1.5
3,481,582	-		Sama_2927	0.11	-1.2
3,481,665	-		Sama_2927	0.30	-1.2
3,481,665	-		Sama_2927	0.30	-1.0
3,481,685	+		Sama_2927	0.35	-2.0
3,481,685	+		Sama_2927	0.35	-0.4
3,481,699	+		Sama_2927	0.38	-0.6
3,481,699	+		Sama_2927	0.38	-0.6
3,481,699	+		Sama_2927	0.38	-0.4
3,481,699	+		Sama_2927	0.38	-0.3
3,481,700	-		Sama_2927	0.38	-0.5
3,481,700	-		Sama_2927	0.38	-0.3
3,481,700	-		Sama_2927	0.38	-0.5
3,481,700	-		Sama_2927	0.38	-2.0
3,481,782	+		Sama_2927	0.57	-1.4
3,481,782	+		Sama_2927	0.57	+0.6
3,481,782	+		Sama_2927	0.57	-1.7
3,481,783	-		Sama_2927	0.58	-2.4
3,481,783	-		Sama_2927	0.58	-0.6
3,481,783	-		Sama_2927	0.58	-0.0
3,481,805	-		Sama_2927	0.63	-1.2
3,481,848	-		Sama_2927	0.73	-0.1
3,481,972	+				+1.4
3,481,972	+				+0.4
3,481,982	-				+0.0
3,481,982	-				+0.9
3,481,998	+				-0.3
3,481,999	-				-0.3
3,481,999	-				-0.4
3,481,999	-				-0.2
3,481,999	-				-2.8
3,482,003	+				-1.1
3,482,003	+				-2.2
3,482,003	+				-0.8
3,482,004	-				-0.0
3,482,036	+				-1.1
3,482,046	+				-1.7
3,482,046	+				-1.7
3,482,047	-				+0.7
3,482,053	-				-1.8
3,482,090	+				+0.9
3,482,090	+				-0.9
3,482,090	+				-0.6
3,482,090	+				+0.8
3,482,090	+				-0.8
3,482,091	-				-1.0
3,482,091	-				-0.3
3,482,091	-				+0.5
3,482,096	-				+0.2
3,482,175	+		Sama_2928	0.12	-0.3
3,482,175	+		Sama_2928	0.12	-2.3
3,482,175	+		Sama_2928	0.12	-0.8
3,482,176	-		Sama_2928	0.12	-0.2
3,482,238	+		Sama_2928	0.19	+0.2
3,482,239	-		Sama_2928	0.19	-1.8
3,482,239	-		Sama_2928	0.19	-1.4
3,482,267	+		Sama_2928	0.22	+0.4
3,482,267	+		Sama_2928	0.22	+0.4
3,482,267	+		Sama_2928	0.22	+0.1
3,482,268	-		Sama_2928	0.22	-2.6
3,482,423	+		Sama_2928	0.40	-0.4
3,482,423	+		Sama_2928	0.40	+0.8
3,482,424	-		Sama_2928	0.40	-2.4
3,482,437	+		Sama_2928	0.41	+0.6
3,482,438	-		Sama_2928	0.41	-2.1
3,482,438	-		Sama_2928	0.41	-0.2
3,482,438	-		Sama_2928	0.41	-0.5
3,482,568	+		Sama_2928	0.56	+0.8
3,482,568	+		Sama_2928	0.56	-0.3
3,482,568	+		Sama_2928	0.56	-0.5
3,482,644	+		Sama_2928	0.65	+0.1
3,482,645	-		Sama_2928	0.65	-3.0
3,482,645	-		Sama_2928	0.65	-0.8
3,482,645	-		Sama_2928	0.65	-1.2
3,482,645	-		Sama_2928	0.65	-0.8
3,482,663	+		Sama_2928	0.67	+0.4
3,482,752	+		Sama_2928	0.77	-1.3
3,482,752	+		Sama_2928	0.77	-0.9
3,482,753	-		Sama_2928	0.77	-2.3
3,482,773	+		Sama_2928	0.79	-2.3
3,482,773	+		Sama_2928	0.79	-0.4
3,482,787	+		Sama_2928	0.81	-1.2
3,482,787	+		Sama_2928	0.81	-0.4
3,482,787	+		Sama_2928	0.81	-1.4
3,482,788	-		Sama_2928	0.81	+0.2
3,482,798	+		Sama_2928	0.82	+0.4
3,482,798	+		Sama_2928	0.82	-1.7
3,482,798	+		Sama_2928	0.82	+0.4
3,482,798	+		Sama_2928	0.82	-0.6
3,482,798	+		Sama_2928	0.82	-0.1
3,482,798	+		Sama_2928	0.82	-1.0
3,482,798	+		Sama_2928	0.82	-0.8
3,482,798	+		Sama_2928	0.82	+0.3
3,482,798	+		Sama_2928	0.82	+0.7
3,482,798	+		Sama_2928	0.82	-0.5
3,482,798	+		Sama_2928	0.82	-1.9
3,482,798	+		Sama_2928	0.82	-1.0
3,482,798	+		Sama_2928	0.82	-0.7
3,482,798	+		Sama_2928	0.82	-2.0
3,482,798	+		Sama_2928	0.82	-1.8
3,482,798	+		Sama_2928	0.82	-2.8
3,482,798	+		Sama_2928	0.82	-0.9
3,482,799	-		Sama_2928	0.82	-0.8
3,482,799	-		Sama_2928	0.82	-0.3
3,482,799	-		Sama_2928	0.82	-1.1
3,482,799	-		Sama_2928	0.82	-1.8
3,482,800	+		Sama_2928	0.82	+0.5
3,482,801	-		Sama_2928	0.82	-3.3
3,482,801	-		Sama_2928	0.82	-2.4
3,482,877	+				-0.2
3,482,925	+				+0.2
3,482,957	+				-2.3
3,482,957	+				-1.2
3,482,958	-				+0.2
3,482,958	-				+0.1