Strain Fitness in Shewanella amazonensis SB2B around Sama_2512

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
3,017,996	+				+0.8
3,017,997	-				+0.4
3,017,997	-				-0.3
3,018,013	-				-0.7
3,018,013	-				+0.1
3,018,013	-				+0.9
3,018,013	-				-1.6
3,018,013	-				+0.4
3,018,013	-				+1.6
3,018,013	-				+1.3
3,018,015	-				+0.1
3,018,035	+				-0.8
3,018,035	+				+0.2
3,018,036	-				+0.6
3,018,068	+				+2.2
3,018,068	+				-0.3
3,018,072	+				-0.2
3,018,073	-				-0.2
3,018,073	-				+0.4
3,018,073	-				-0.0
3,018,073	-				-0.3
3,018,073	-				-0.4
3,018,092	+				+1.7
3,018,092	+				+0.0
3,018,092	+				-0.3
3,018,092	+				+1.8
3,018,092	+				+2.2
3,018,093	-				+1.6
3,018,093	-				+1.2
3,018,094	+				-0.0
3,018,095	-				-1.3
3,018,095	-				-0.3
3,018,221	-				+0.7
3,018,238	+				-0.7
3,018,239	-				-2.0
3,018,239	-				-1.6
3,018,257	+		Sama_2512	0.10	-0.8
3,018,292	+		Sama_2512	0.14	-0.2
3,018,292	+		Sama_2512	0.14	+1.2
3,018,293	-		Sama_2512	0.14	+0.5
3,018,381	-		Sama_2512	0.24	+0.2
3,018,381	-		Sama_2512	0.24	+0.2
3,018,381	-		Sama_2512	0.24	-0.7
3,018,396	+		Sama_2512	0.25	-0.7
3,018,413	+		Sama_2512	0.27	+0.3
3,018,414	-		Sama_2512	0.27	-0.2
3,018,414	-		Sama_2512	0.27	+1.4
3,018,417	-		Sama_2512	0.28	-0.8
3,018,417	-		Sama_2512	0.28	+0.6
3,018,417	-		Sama_2512	0.28	+0.6
3,018,437	+		Sama_2512	0.30	+1.0
3,018,437	+		Sama_2512	0.30	-0.7
3,018,438	-		Sama_2512	0.30	+1.2
3,018,438	-		Sama_2512	0.30	+0.2
3,018,438	-		Sama_2512	0.30	-1.0
3,018,438	-		Sama_2512	0.30	+0.6
3,018,438	-		Sama_2512	0.30	-0.0
3,018,476	+		Sama_2512	0.34	+1.2
3,018,476	+		Sama_2512	0.34	-1.4
3,018,477	-		Sama_2512	0.34	-1.3
3,018,477	-		Sama_2512	0.34	-0.4
3,018,477	-		Sama_2512	0.34	+1.3
3,018,477	-		Sama_2512	0.34	-0.0
3,018,477	-		Sama_2512	0.34	-2.3
3,018,477	-		Sama_2512	0.34	-1.8
3,018,478	+		Sama_2512	0.34	+0.4
3,018,478	+		Sama_2512	0.34	-0.8
3,018,478	+		Sama_2512	0.34	-2.2
3,018,479	-		Sama_2512	0.35	-0.7
3,018,479	-		Sama_2512	0.35	-0.5
3,018,479	-		Sama_2512	0.35	-3.0
3,018,479	-		Sama_2512	0.35	+0.0
3,018,492	+		Sama_2512	0.36	-0.3
3,018,492	+		Sama_2512	0.36	-0.6
3,018,536	-		Sama_2512	0.41	+0.6
3,018,536	-		Sama_2512	0.41	+1.0
3,018,536	-		Sama_2512	0.41	+0.6
3,018,566	+		Sama_2512	0.44	-1.2
3,018,567	-		Sama_2512	0.44	-0.4
3,018,567	-		Sama_2512	0.44	+0.4
3,018,576	+		Sama_2512	0.45	-1.7
3,018,577	-		Sama_2512	0.45	+0.4
3,018,577	-		Sama_2512	0.45	+1.8
3,018,577	-		Sama_2512	0.45	+0.9
3,018,674	+		Sama_2512	0.56	+0.3
3,018,697	+		Sama_2512	0.58	+0.1
3,018,697	+		Sama_2512	0.58	-1.4
3,018,698	-		Sama_2512	0.59	-0.2
3,018,698	-		Sama_2512	0.59	-0.4
3,018,744	+		Sama_2512	0.64	-1.2
3,018,744	+		Sama_2512	0.64	+0.0
3,018,744	+		Sama_2512	0.64	-1.2
3,018,753	+		Sama_2512	0.65	+0.7
3,018,754	-		Sama_2512	0.65	+0.2
3,018,764	-		Sama_2512	0.66	-0.2
3,018,821	+		Sama_2512	0.72	-0.3
3,018,822	-		Sama_2512	0.72	-0.4
3,018,822	-		Sama_2512	0.72	-1.1
3,018,822	-		Sama_2512	0.72	+1.8
3,018,831	+		Sama_2512	0.73	-2.1
3,018,832	-		Sama_2512	0.73	+1.2
3,018,846	+		Sama_2512	0.75	-0.8
3,018,899	-		Sama_2512	0.81	-1.2
3,018,899	-		Sama_2512	0.81	+0.9
3,018,943	+		Sama_2512	0.85	-1.1
3,018,943	+		Sama_2512	0.85	+0.4
3,018,985	+				-0.8
3,019,000	+				+1.0
3,019,000	+				-0.1
3,019,000	+				-0.2
3,019,049	-				+2.1
3,019,259	+		Sama_2513	0.21	-2.0
3,019,297	+		Sama_2513	0.28	-1.1
3,019,297	+		Sama_2513	0.28	+0.8
3,019,297	+		Sama_2513	0.28	-1.3
3,019,298	-		Sama_2513	0.28	-0.1
3,019,314	+		Sama_2513	0.30	+0.9
3,019,315	-		Sama_2513	0.30	-1.9
3,019,315	-		Sama_2513	0.30	-1.0
3,019,315	-		Sama_2513	0.30	-0.9
3,019,315	-		Sama_2513	0.30	-1.0
3,019,321	-		Sama_2513	0.31	-3.1
3,019,352	+		Sama_2513	0.36	-1.8
3,019,352	+		Sama_2513	0.36	-1.7
3,019,427	+		Sama_2513	0.48	-0.4
3,019,428	-		Sama_2513	0.49	+1.4
3,019,428	-		Sama_2513	0.49	-1.4
3,019,454	+		Sama_2513	0.53	-0.2
3,019,455	-		Sama_2513	0.53	-1.1
3,019,455	-		Sama_2513	0.53	-0.4
3,019,455	-		Sama_2513	0.53	-0.4
3,019,475	+		Sama_2513	0.56	-1.6
3,019,475	+		Sama_2513	0.56	-1.3
3,019,475	+		Sama_2513	0.56	+0.4
3,019,475	+		Sama_2513	0.56	+0.4
3,019,475	+		Sama_2513	0.56	+0.6
3,019,475	+		Sama_2513	0.56	+1.6
3,019,476	-		Sama_2513	0.56	+0.6
3,019,476	-		Sama_2513	0.56	-0.3
3,019,476	-		Sama_2513	0.56	-0.4
3,019,476	-		Sama_2513	0.56	-1.3
3,019,476	-		Sama_2513	0.56	-0.8
3,019,525	+		Sama_2513	0.64	-1.4
3,019,606	-		Sama_2513	0.77	-1.8
3,019,606	-		Sama_2513	0.77	-1.4
3,019,606	-		Sama_2513	0.77	+0.6
3,019,606	-		Sama_2513	0.77	+2.1
3,019,636	+		Sama_2513	0.82	-0.4
3,019,636	+		Sama_2513	0.82	-2.0
3,019,636	+		Sama_2513	0.82	+1.0
3,019,637	-		Sama_2513	0.82	+0.7
3,019,637	-		Sama_2513	0.82	+0.1
3,019,710	+				+1.6
3,019,710	+				+0.7
3,019,710	+				-1.0
3,019,711	-				+0.3
3,019,767	-				-0.5
3,019,825	+				+0.2
3,019,873	-				-0.4
3,019,959	-				+1.3
3,020,018	+				-1.0