Strain Fitness in Shewanella amazonensis SB2B around Sama_2446

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
2,942,971	+		Sama_2445	0.44	-0.5
2,942,971	+		Sama_2445	0.44	+0.8
2,942,971	+		Sama_2445	0.44	-2.4
2,942,972	-		Sama_2445	0.44	-0.8
2,943,012	-		Sama_2445	0.47	-1.3
2,943,178	+		Sama_2445	0.59	-1.2
2,943,192	-		Sama_2445	0.60	-1.0
2,943,194	+		Sama_2445	0.60	-0.0
2,943,194	+		Sama_2445	0.60	-1.6
2,943,194	+		Sama_2445	0.60	-1.6
2,943,275	-		Sama_2445	0.66	-0.8
2,943,305	-		Sama_2445	0.69	+1.2
2,943,316	+		Sama_2445	0.69	+0.3
2,943,317	-		Sama_2445	0.70	-0.0
2,943,317	-		Sama_2445	0.70	-1.5
2,943,317	-		Sama_2445	0.70	+0.3
2,943,363	-		Sama_2445	0.73	-0.6
2,943,363	-		Sama_2445	0.73	+1.2
2,943,363	-		Sama_2445	0.73	+0.4
2,943,363	-		Sama_2445	0.73	-1.0
2,943,363	-		Sama_2445	0.73	+0.5
2,943,368	+		Sama_2445	0.73	+1.1
2,943,399	-		Sama_2445	0.76	+1.0
2,943,489	+		Sama_2445	0.82	-1.1
2,943,490	-		Sama_2445	0.83	-0.0
2,943,532	+		Sama_2445	0.86	-0.9
2,943,532	+		Sama_2445	0.86	+0.4
2,943,533	-		Sama_2445	0.86	-1.7
2,943,533	-		Sama_2445	0.86	-0.2
2,943,533	-		Sama_2445	0.86	+0.7
2,943,563	+		Sama_2445	0.88	+0.4
2,943,564	-		Sama_2445	0.88	-0.8
2,943,564	-		Sama_2445	0.88	-1.3
2,943,625	+				-1.0
2,943,625	+				-0.0
2,943,625	+				+1.4
2,943,626	-				+1.9
2,943,626	-				-0.0
2,943,626	-				+2.2
2,943,626	-				-0.0
2,943,651	+				-1.4
2,943,652	-				-0.6
2,943,667	+				-1.0
2,943,667	+				-0.5
2,943,838	-				-2.1
2,943,838	-				-1.0
2,943,878	+				-1.2
2,943,879	-				-0.2
2,943,880	+				-1.5
2,943,880	+				-0.2
2,943,880	+				+1.5
2,943,881	-				-0.3
2,943,881	-				-3.6
2,943,900	-				-0.3
2,943,914	+				+0.6
2,943,940	+				-1.5
2,943,940	+				-0.6
2,943,941	-				-0.0
2,943,941	-				-0.3
2,944,212	-		Sama_2446	0.26	-1.8
2,944,254	+		Sama_2446	0.30	-0.6
2,944,255	-		Sama_2446	0.30	+0.2
2,944,415	+		Sama_2446	0.46	-0.5
2,944,462	+		Sama_2446	0.50	-1.2
2,944,462	+		Sama_2446	0.50	-2.5
2,944,463	-		Sama_2446	0.50	-1.6
2,944,463	-		Sama_2446	0.50	-1.5
2,944,500	-		Sama_2446	0.54	+0.7
2,944,567	+		Sama_2446	0.60	-0.3
2,944,568	-		Sama_2446	0.60	-0.0
2,944,568	-		Sama_2446	0.60	-0.4
2,944,636	+		Sama_2446	0.67	-0.5
2,944,665	-		Sama_2446	0.70	-0.7
2,944,665	-		Sama_2446	0.70	-0.4
2,944,665	-		Sama_2446	0.70	-1.9
2,944,775	+		Sama_2446	0.80	-1.5
2,944,775	+		Sama_2446	0.80	-0.5
2,944,775	+		Sama_2446	0.80	-1.1
2,945,053	+				-1.5
2,945,084	+				-2.3
2,945,085	-				+0.1
2,945,088	+				+0.7
2,945,088	+				-1.0
2,945,089	-				-0.3
2,945,089	-				-1.5
2,945,089	-				+0.1
2,945,089	-				-1.3
2,945,206	+				-0.3
2,945,206	+				-1.6
2,945,207	-				-0.0
2,945,207	-				-0.4
2,945,225	-				+0.3
2,945,269	+		Sama_2447	0.12	+1.3
2,945,270	-		Sama_2447	0.12	-1.0
2,945,270	-		Sama_2447	0.12	-1.1
2,945,297	+		Sama_2447	0.14	-1.4
2,945,336	-		Sama_2447	0.17	-0.7
2,945,480	+		Sama_2447	0.27	+0.5
2,945,480	+		Sama_2447	0.27	+1.3
2,945,481	-		Sama_2447	0.28	-0.7
2,945,481	-		Sama_2447	0.28	-0.8
2,945,481	-		Sama_2447	0.28	-1.2
2,945,481	-		Sama_2447	0.28	+0.4
2,945,516	+		Sama_2447	0.30	-0.8
2,945,516	+		Sama_2447	0.30	-0.7
2,945,517	-		Sama_2447	0.30	-0.8
2,945,517	-		Sama_2447	0.30	-0.0
2,945,517	-		Sama_2447	0.30	-1.8
2,945,517	-		Sama_2447	0.30	-0.4
2,945,520	-		Sama_2447	0.30	-0.9
2,945,520	-		Sama_2447	0.30	-1.3
2,945,786	-		Sama_2447	0.50	-0.2
2,945,948	+		Sama_2447	0.62	-2.2
2,945,958	-		Sama_2447	0.63	-2.3
2,945,958	-		Sama_2447	0.63	-1.6
2,945,978	-		Sama_2447	0.65	-0.7