Strain Fitness in Shewanella amazonensis SB2B around Sama_2034

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
2,471,026	+		Sama_2032	0.71	-0.2
2,471,027	-		Sama_2032	0.71	-0.0
2,471,234	+				-0.7
2,471,283	-				+1.5
2,471,283	-				-0.5
2,471,325	+				+1.2
2,471,326	-				+0.1
2,471,366	-				-0.1
2,471,411	+				+0.8
2,471,412	-				+2.4
2,471,412	-				-0.1
2,471,427	+				-1.7
2,471,434	+				-0.0
2,471,449	+				-0.5
2,471,450	-				-0.7
2,471,489	+				-1.2
2,471,489	+				+1.5
2,471,490	-				-0.9
2,471,544	+		Sama_2033	0.18	-0.0
2,471,545	-		Sama_2033	0.18	-0.0
2,471,552	+		Sama_2033	0.19	-0.8
2,471,553	-		Sama_2033	0.19	-1.2
2,471,607	+		Sama_2033	0.30	+1.3
2,471,627	+		Sama_2033	0.33	+1.9
2,471,648	-		Sama_2033	0.37	+0.1
2,471,648	-		Sama_2033	0.37	+0.8
2,471,649	-		Sama_2033	0.37	+1.1
2,471,655	+		Sama_2033	0.39	+1.5
2,471,655	+		Sama_2033	0.39	+0.5
2,471,658	+		Sama_2033	0.39	-0.0
2,471,771	+		Sama_2033	0.60	+1.0
2,471,780	+		Sama_2033	0.62	-0.0
2,471,855	+		Sama_2033	0.76	-0.8
2,471,855	+		Sama_2033	0.76	+0.2
2,471,911	+		Sama_2033	0.87	+0.8
2,472,075	-		Sama_2034	0.17	-0.7
2,472,188	+		Sama_2034	0.35	-2.1
2,472,189	-		Sama_2034	0.35	-1.0
2,472,498	+		Sama_2034	0.86	+1.1
2,472,499	-		Sama_2034	0.86	+0.7
2,472,548	+				-0.4
2,472,549	-				-0.7
2,472,581	+				-1.0
2,472,582	-				+1.1
2,472,608	+				-0.2
2,472,608	+				-0.8
2,472,686	-				-1.1
2,472,688	+				-0.5
2,472,688	+				-1.9
2,472,688	+				-0.4
2,472,688	+				-0.4
2,472,688	+				-0.2
2,472,689	-				+0.1
2,472,689	-				-0.5
2,472,689	-				-1.6
2,472,689	-				+5.1
2,472,692	+				-0.4
2,472,692	+				-0.7
2,472,692	+				-1.8
2,472,692	+				+0.8
2,472,693	-				+1.8
2,472,693	-				-1.6
2,472,693	-				+0.6
2,472,693	-				+0.0
2,472,727	-				+0.6
2,472,750	-				-0.5
2,472,806	-		Sama_2035	0.14	+1.2
2,472,806	-		Sama_2035	0.14	-0.2
2,472,858	+		Sama_2035	0.24	-0.1
2,472,858	+		Sama_2035	0.24	+3.8
2,472,858	+		Sama_2035	0.24	-0.4
2,472,858	+		Sama_2035	0.24	-0.0
2,472,858	+		Sama_2035	0.24	-0.4
2,472,858	+		Sama_2035	0.24	+1.2
2,472,859	-		Sama_2035	0.24	-0.0
2,472,859	-		Sama_2035	0.24	-1.0
2,472,859	-		Sama_2035	0.24	+0.1
2,472,859	-		Sama_2035	0.24	-0.9
2,472,859	-		Sama_2035	0.24	+0.9
2,472,864	-		Sama_2035	0.25	-0.4
2,472,883	-		Sama_2035	0.28	-0.2
2,472,939	-		Sama_2035	0.38	+1.6
2,472,947	+		Sama_2035	0.40	-0.5
2,472,963	-		Sama_2035	0.43	-0.0
2,473,047	+		Sama_2035	0.58	+0.3
2,473,047	+		Sama_2035	0.58	-1.4
2,473,055	+		Sama_2035	0.59	+0.3
2,473,146	+		Sama_2035	0.75	+5.0
2,473,147	-		Sama_2035	0.76	-2.8
2,473,163	+		Sama_2035	0.79	+1.1
2,473,163	+		Sama_2035	0.79	-1.3
2,473,184	+		Sama_2035	0.82	-0.0
2,473,184	+		Sama_2035	0.82	+1.2
2,473,185	-		Sama_2035	0.83	+1.2
2,473,185	-		Sama_2035	0.83	+0.8
2,473,185	-		Sama_2035	0.83	-0.4
2,473,185	-		Sama_2035	0.83	-0.2
2,473,202	+		Sama_2035	0.86	+0.5
2,473,203	-		Sama_2035	0.86	-0.2
2,473,203	-		Sama_2035	0.86	+0.9
2,473,206	+		Sama_2035	0.86	-0.2
2,473,206	+		Sama_2035	0.86	-1.2
2,473,206	+		Sama_2035	0.86	-0.2
2,473,206	+		Sama_2035	0.86	-1.5
2,473,206	+		Sama_2035	0.86	-0.8
2,473,206	+		Sama_2035	0.86	-0.2
2,473,207	-		Sama_2035	0.86	-1.1
2,473,207	-		Sama_2035	0.86	-1.3
2,473,207	-		Sama_2035	0.86	-0.1
2,473,207	-		Sama_2035	0.86	-0.2
2,473,219	+		Sama_2035	0.89	+0.6
2,473,266	+				+1.2
2,473,303	+				+1.2
2,473,303	+				+1.6
2,473,303	+				-0.8
2,473,303	+				+0.5
2,473,303	+				-1.2
2,473,303	+				-1.4
2,473,304	-				-0.0
2,473,304	-				+1.2
2,473,314	-				-0.2
2,473,314	-				+0.2
2,473,397	+				-1.7
2,473,397	+				+0.5
2,473,398	-				-0.2
2,473,398	-				-0.2
2,473,402	+				-1.9
2,473,402	+				+0.1
2,473,403	-				-0.9
2,473,423	+				+0.4
2,473,432	+		Sama_2036	0.11	+0.5
2,473,432	+		Sama_2036	0.11	-0.2
2,473,432	+		Sama_2036	0.11	-0.0
2,473,433	-		Sama_2036	0.11	-0.0
2,473,453	+		Sama_2036	0.14	+1.0
2,473,454	-		Sama_2036	0.14	-2.1
2,473,454	-		Sama_2036	0.14	+2.8
2,473,498	+		Sama_2036	0.21	-0.0
2,473,499	-		Sama_2036	0.21	-0.4
2,473,499	-		Sama_2036	0.21	-0.4