Strain Fitness in Shewanella amazonensis SB2B around Sama_2032

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
2,469,331	+		Sama_2030	0.33	-0.9
2,469,332	-		Sama_2030	0.33	-0.8
2,469,410	-		Sama_2030	0.54	+0.2
2,469,448	+		Sama_2030	0.65	-0.0
2,469,479	+		Sama_2030	0.74	-0.0
2,469,479	+		Sama_2030	0.74	+0.3
2,469,516	+		Sama_2030	0.84	+0.6
2,469,516	+		Sama_2030	0.84	+0.5
2,469,516	+		Sama_2030	0.84	-1.4
2,469,517	-		Sama_2030	0.84	-0.8
2,469,517	-		Sama_2030	0.84	-1.1
2,469,517	-		Sama_2030	0.84	+2.8
2,469,517	-		Sama_2030	0.84	+0.6
2,469,608	+				-2.0
2,469,657	-		Sama_2031	0.14	+2.0
2,469,747	+		Sama_2031	0.28	+0.8
2,469,748	-		Sama_2031	0.28	+0.6
2,469,753	+		Sama_2031	0.29	-0.7
2,469,762	+		Sama_2031	0.30	-0.2
2,469,762	+		Sama_2031	0.30	-1.2
2,469,762	+		Sama_2031	0.30	+0.8
2,469,763	-		Sama_2031	0.30	-0.8
2,469,766	+		Sama_2031	0.31	-1.7
2,469,767	-		Sama_2031	0.31	-0.5
2,469,767	-		Sama_2031	0.31	-1.6
2,469,767	-		Sama_2031	0.31	-1.8
2,469,782	+		Sama_2031	0.33	+0.2
2,469,783	-		Sama_2031	0.33	-1.4
2,469,815	+		Sama_2031	0.38	+0.5
2,469,816	-		Sama_2031	0.38	+1.0
2,469,897	+		Sama_2031	0.51	+1.1
2,469,897	+		Sama_2031	0.51	+1.2
2,469,898	-		Sama_2031	0.51	-1.0
2,469,918	-		Sama_2031	0.54	-0.8
2,469,921	-		Sama_2031	0.55	-1.4
2,469,921	-		Sama_2031	0.55	+0.3
2,470,072	+		Sama_2031	0.79	-1.9
2,470,073	-		Sama_2031	0.79	+1.1
2,470,236	+				+2.1
2,470,236	+				-0.0
2,470,237	-				+0.5
2,470,237	-				-0.0
2,470,244	-				+2.2
2,470,297	+				-0.8
2,470,297	+				-0.1
2,470,297	+				+0.2
2,470,298	-				-0.4
2,470,303	-				-0.8
2,470,409	-		Sama_2032	0.11	-1.4
2,470,412	-		Sama_2032	0.11	+0.2
2,470,412	-		Sama_2032	0.11	-0.3
2,470,442	-		Sama_2032	0.14	-0.2
2,470,447	-		Sama_2032	0.14	+1.5
2,470,447	-		Sama_2032	0.14	-0.0
2,470,447	-		Sama_2032	0.14	+1.1
2,470,447	-		Sama_2032	0.14	+0.2
2,470,447	-		Sama_2032	0.14	-1.9
2,470,447	-		Sama_2032	0.14	+1.2
2,470,493	-		Sama_2032	0.19	-0.4
2,470,493	-		Sama_2032	0.19	+1.4
2,470,493	-		Sama_2032	0.19	-1.3
2,470,493	-		Sama_2032	0.19	+1.2
2,470,493	-		Sama_2032	0.19	+1.2
2,470,746	-		Sama_2032	0.44	+0.4
2,470,759	-		Sama_2032	0.45	+0.1
2,470,825	-		Sama_2032	0.52	+2.3
2,470,851	+		Sama_2032	0.54	+1.1
2,470,851	+		Sama_2032	0.54	+0.8
2,470,852	-		Sama_2032	0.54	+0.7
2,470,852	-		Sama_2032	0.54	+1.2
2,470,852	-		Sama_2032	0.54	+3.8
2,470,855	+		Sama_2032	0.54	-0.5
2,470,855	+		Sama_2032	0.54	-0.7
2,470,855	+		Sama_2032	0.54	-0.8
2,470,856	-		Sama_2032	0.55	+1.1
2,470,856	-		Sama_2032	0.55	+1.8
2,470,887	-		Sama_2032	0.58	-1.3
2,470,887	-		Sama_2032	0.58	-1.5
2,470,904	-		Sama_2032	0.59	+0.1
2,470,913	-		Sama_2032	0.60	+1.6
2,470,913	-		Sama_2032	0.60	-0.5
2,470,913	-		Sama_2032	0.60	-0.5
2,470,913	-		Sama_2032	0.60	-0.9
2,470,957	-		Sama_2032	0.65	+1.8
2,470,969	+		Sama_2032	0.66	+2.1
2,470,970	-		Sama_2032	0.66	-0.5
2,471,026	+		Sama_2032	0.71	-0.2
2,471,027	-		Sama_2032	0.71	-0.0
2,471,234	+				-0.7
2,471,283	-				+1.5
2,471,283	-				-0.5
2,471,325	+				+1.2
2,471,326	-				+0.1
2,471,366	-				-0.1
2,471,411	+				+0.8
2,471,412	-				+2.4
2,471,412	-				-0.1
2,471,427	+				-1.7
2,471,434	+				-0.0
2,471,449	+				-0.5
2,471,450	-				-0.7
2,471,489	+				-1.2
2,471,489	+				+1.5
2,471,490	-				-0.9
2,471,544	+		Sama_2033	0.18	-0.0
2,471,545	-		Sama_2033	0.18	-0.0
2,471,552	+		Sama_2033	0.19	-0.8
2,471,553	-		Sama_2033	0.19	-1.2
2,471,607	+		Sama_2033	0.30	+1.3
2,471,627	+		Sama_2033	0.33	+1.9
2,471,648	-		Sama_2033	0.37	+0.1
2,471,648	-		Sama_2033	0.37	+0.8
2,471,649	-		Sama_2033	0.37	+1.1
2,471,655	+		Sama_2033	0.39	+1.5
2,471,655	+		Sama_2033	0.39	+0.5
2,471,658	+		Sama_2033	0.39	-0.0
2,471,771	+		Sama_2033	0.60	+1.0
2,471,780	+		Sama_2033	0.62	-0.0
2,471,855	+		Sama_2033	0.76	-0.8
2,471,855	+		Sama_2033	0.76	+0.2
2,471,911	+		Sama_2033	0.87	+0.8
2,472,075	-		Sama_2034	0.17	-0.7
2,472,188	+		Sama_2034	0.35	-2.1
2,472,189	-		Sama_2034	0.35	-1.0