Strain Fitness in Shewanella amazonensis SB2B around Sama_1805

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
2,195,623	+				-1.1
2,195,623	+				-0.2
2,195,993	+		Sama_1804	0.41	+0.6
2,195,993	+		Sama_1804	0.41	+0.9
2,195,999	+		Sama_1804	0.42	-0.3
2,196,020	+		Sama_1804	0.44	+0.2
2,196,020	+		Sama_1804	0.44	-1.0
2,196,053	+		Sama_1804	0.48	-1.1
2,196,316	+		Sama_1804	0.77	-0.9
2,196,316	+		Sama_1804	0.77	-0.2
2,196,352	+		Sama_1804	0.81	-0.3
2,196,352	+		Sama_1804	0.81	-0.8
2,196,359	+		Sama_1804	0.82	-0.2
2,196,464	+				+0.7
2,196,543	+				+0.8
2,196,664	-				-2.4
2,196,685	+				-0.5
2,196,686	-				+2.1
2,196,786	+		Sama_1805	0.16	+0.5
2,196,787	-		Sama_1805	0.16	-1.6
2,196,821	+		Sama_1805	0.19	+1.0
2,196,836	+		Sama_1805	0.20	-1.0
2,197,037	-		Sama_1805	0.37	+0.2
2,197,126	-		Sama_1805	0.44	+0.0
2,197,126	-		Sama_1805	0.44	-0.2
2,197,148	-		Sama_1805	0.46	+0.0
2,197,257	+		Sama_1805	0.55	+0.2
2,197,339	+		Sama_1805	0.62	+3.2
2,197,339	+		Sama_1805	0.62	-0.3
2,197,340	-		Sama_1805	0.62	-0.5
2,197,340	-		Sama_1805	0.62	+1.3
2,197,340	-		Sama_1805	0.62	+1.8
2,197,340	-		Sama_1805	0.62	+0.5
2,197,343	-		Sama_1805	0.62	-0.0
2,197,343	-		Sama_1805	0.62	+0.8
2,197,349	-		Sama_1805	0.63	+0.8
2,197,565	+		Sama_1805	0.81	+0.5
2,197,566	-		Sama_1805	0.81	-0.3
2,197,566	-		Sama_1805	0.81	-0.2
2,197,567	+		Sama_1805	0.81	+0.8
2,197,567	+		Sama_1805	0.81	+2.5
2,197,568	-		Sama_1805	0.81	+1.1
2,197,568	-		Sama_1805	0.81	+2.4
2,197,594	+		Sama_1805	0.84	-1.1
2,197,654	-		Sama_1805	0.89	+1.2
2,197,680	-				+1.2
2,197,680	-				-0.9
2,197,682	-				-1.8
2,197,682	-				-0.2
2,197,707	-				-0.3
2,197,786	-				-2.0
2,197,786	-				+1.6
2,197,786	-				+2.2
2,197,798	-				-0.5
2,197,834	-				-0.5
2,197,834	-				-1.9
2,197,854	-				-2.5
2,197,868	+				+1.2
2,197,939	-				+1.1
2,197,939	-				+2.7
2,197,970	-				+0.2
2,198,101	-		Sama_R0069	0.43	+1.6
2,198,101	-		Sama_R0069	0.43	-1.0
2,198,101	-		Sama_R0069	0.43	-1.4
2,198,101	-		Sama_R0069	0.43	+1.8
2,198,103	-		Sama_R0069	0.46	+1.8
2,198,185	+				+1.2
2,198,186	-				-1.1
2,198,194	-				-0.9