Strain Fitness in Shewanella amazonensis SB2B around Sama_1717

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
2,100,787	+		Sama_1716	0.88	+1.0
2,101,061	+				-0.9
2,101,061	+				+0.8
2,101,061	+				+0.2
2,101,062	-				+0.5
2,101,062	-				+2.6
2,101,062	-				+2.4
2,101,062	-				-1.8
2,101,062	-				-0.2
2,101,117	-				-0.5
2,101,117	-				-0.3
2,101,188	+				-1.3
2,101,190	+				-0.2
2,101,190	+				-2.3
2,101,190	+				+0.8
2,101,191	-				-0.5
2,101,191	-				-1.8
2,101,191	-				+1.4
2,101,204	-				+0.1
2,101,204	-				-0.2
2,101,254	+				+0.0
2,101,255	-				-0.6
2,101,255	-				+0.5
2,101,263	+				+1.2
2,101,263	+				+1.4
2,101,264	-				-0.5
2,101,293	-				+1.8
2,101,322	+				-0.3
2,101,340	+				+0.6
2,101,340	+				-0.2
2,101,340	+				+1.5
2,101,340	+				-1.3
2,101,340	+				-0.6
2,101,341	-				+0.8
2,101,341	-				-1.6
2,101,341	-				+0.2
2,101,349	+				-1.1
2,101,356	+				+1.2
2,101,356	+				+1.6
2,101,356	+				+0.3
2,101,356	+				+0.7
2,101,356	+				+0.2
2,101,356	+				-0.3
2,101,356	+				+1.2
2,101,357	-				-1.1
2,101,357	-				+0.5
2,101,357	-				-1.5
2,101,369	-				+0.5
2,101,465	-				+0.2
2,101,469	+				+1.2
2,101,470	-				+0.6
2,101,506	+				+0.0
2,101,525	+				+0.5
2,101,526	-				-0.9
2,101,544	+				+0.4
2,101,687	+				+0.3
2,101,719	+				+0.2
2,101,719	+				+1.4
2,101,749	+				+2.2
2,101,750	-				+2.1
2,101,750	-				-1.6
2,101,785	-				+0.2
2,101,838	+				+2.8
2,101,838	+				+0.0
2,101,839	-				-1.3
2,101,839	-				+0.5
2,101,839	-				-0.9
2,101,839	-				+1.7
2,101,839	-				-2.3
2,101,861	+				+0.9
2,101,862	-				+1.7
2,101,862	-				+0.6
2,101,862	-				-0.2
2,101,862	-				-0.3
2,101,862	-				+0.2
2,101,971	+		Sama_1717	0.11	+2.8
2,101,972	-		Sama_1717	0.11	-0.9
2,101,972	-		Sama_1717	0.11	-1.1
2,101,980	+		Sama_1717	0.12	-1.2
2,101,989	+		Sama_1717	0.12	-0.6
2,101,989	+		Sama_1717	0.12	+0.9
2,101,989	+		Sama_1717	0.12	-1.3
2,101,990	-		Sama_1717	0.12	-1.2
2,101,990	-		Sama_1717	0.12	+1.0
2,102,008	+		Sama_1717	0.13	+1.6
2,102,068	+		Sama_1717	0.16	+0.2
2,102,068	+		Sama_1717	0.16	-1.4
2,102,068	+		Sama_1717	0.16	+0.2
2,102,068	+		Sama_1717	0.16	-1.3
2,102,069	-		Sama_1717	0.17	+0.2
2,102,069	-		Sama_1717	0.17	+0.5
2,102,142	-		Sama_1717	0.21	+1.0
2,102,196	+		Sama_1717	0.24	-0.6
2,102,298	+		Sama_1717	0.29	+0.8
2,102,299	-		Sama_1717	0.29	+0.0
2,102,299	-		Sama_1717	0.29	+1.4
2,102,301	+		Sama_1717	0.30	-2.2
2,102,301	+		Sama_1717	0.30	-0.9
2,102,302	-		Sama_1717	0.30	+0.5
2,102,302	-		Sama_1717	0.30	-0.8
2,102,302	-		Sama_1717	0.30	+0.2
2,102,321	+		Sama_1717	0.31	-1.2
2,102,402	+		Sama_1717	0.35	-1.6
2,102,402	+		Sama_1717	0.35	+0.9
2,102,402	+		Sama_1717	0.35	+0.8
2,102,453	+		Sama_1717	0.38	+0.2
2,102,495	+		Sama_1717	0.40	-0.2
2,102,523	-		Sama_1717	0.42	+0.2
2,102,594	+		Sama_1717	0.46	+1.1
2,102,595	-		Sama_1717	0.46	-1.0
2,102,596	+		Sama_1717	0.46	-0.5
2,102,597	-		Sama_1717	0.46	-1.4
2,102,597	-		Sama_1717	0.46	+0.8
2,102,597	-		Sama_1717	0.46	+1.2
2,102,597	-		Sama_1717	0.46	+2.8
2,102,625	+		Sama_1717	0.48	-2.1
2,102,626	-		Sama_1717	0.48	-0.8
2,102,701	-		Sama_1717	0.52	+1.2
2,102,756	+		Sama_1717	0.55	+0.2
2,102,756	+		Sama_1717	0.55	+0.2
2,102,757	-		Sama_1717	0.55	-0.7
2,102,757	-		Sama_1717	0.55	-1.0
2,102,757	-		Sama_1717	0.55	-0.9
2,102,852	+		Sama_1717	0.60	+1.2
2,102,852	+		Sama_1717	0.60	+0.0
2,102,852	+		Sama_1717	0.60	-1.6
2,102,852	+		Sama_1717	0.60	+1.8
2,102,853	-		Sama_1717	0.60	-0.3
2,102,885	-		Sama_1717	0.62	+0.2
2,102,902	-		Sama_1717	0.63	-1.1
2,102,928	-		Sama_1717	0.65	+0.2
2,102,947	-		Sama_1717	0.66	-0.8
2,102,963	+		Sama_1717	0.67	+1.8
2,102,964	-		Sama_1717	0.67	+0.8
2,102,964	-		Sama_1717	0.67	-0.9
2,102,967	+		Sama_1717	0.67	-1.6
2,102,967	+		Sama_1717	0.67	-0.5
2,102,967	+		Sama_1717	0.67	+3.4
2,102,968	-		Sama_1717	0.67	-2.0
2,102,968	-		Sama_1717	0.67	-0.3
2,102,968	-		Sama_1717	0.67	-1.3
2,102,970	+		Sama_1717	0.67	+1.8
2,102,970	+		Sama_1717	0.67	+1.2
2,102,970	+		Sama_1717	0.67	-0.3
2,102,971	-		Sama_1717	0.67	+0.0
2,102,971	-		Sama_1717	0.67	-0.8
2,102,971	-		Sama_1717	0.67	-1.6
2,103,018	+		Sama_1717	0.70	-0.1
2,103,018	+		Sama_1717	0.70	-1.8
2,103,019	-		Sama_1717	0.70	-0.2
2,103,019	-		Sama_1717	0.70	-1.1
2,103,084	+		Sama_1717	0.73	-0.8
2,103,099	+		Sama_1717	0.74	-0.4
2,103,125	+		Sama_1717	0.76	-0.2
2,103,126	-		Sama_1717	0.76	-0.5
2,103,149	+		Sama_1717	0.77	+2.5
2,103,154	+		Sama_1717	0.77	+0.4
2,103,155	-		Sama_1717	0.77	+1.6
2,103,171	+		Sama_1717	0.78	-0.3
2,103,171	+		Sama_1717	0.78	-1.2
2,103,171	+		Sama_1717	0.78	-1.1
2,103,172	-		Sama_1717	0.78	+0.8
2,103,172	-		Sama_1717	0.78	-1.1
2,103,202	-		Sama_1717	0.80	+0.2
2,103,279	+		Sama_1717	0.84	+0.7
2,103,284	+		Sama_1717	0.85	+1.4
2,103,389	-				-0.8
2,103,412	-				+0.8
2,103,534	+				+0.4
2,103,534	+				+1.2
2,103,547	+				+0.8
2,103,559	-				-1.3
2,103,623	-				-0.5
2,103,660	+				+2.0
2,103,660	+				+0.1
2,103,676	-				+0.0
2,103,691	-				-0.2
2,103,744	+				+0.6
2,103,744	+				+0.2
2,103,821	+		Sama_1718	0.12	+0.8
2,103,821	+		Sama_1718	0.12	-0.2
2,103,821	+		Sama_1718	0.12	-1.8
2,103,852	+		Sama_1718	0.17	+0.5
2,103,882	+		Sama_1718	0.21	-0.9
2,103,882	+		Sama_1718	0.21	+0.2
2,103,929	+		Sama_1718	0.28	-0.2
2,103,929	+		Sama_1718	0.28	-1.1
2,104,061	+		Sama_1718	0.48	-0.2
2,104,103	+		Sama_1718	0.54	-0.5
2,104,103	+		Sama_1718	0.54	+0.5
2,104,153	+		Sama_1718	0.61	-0.8
2,104,153	+		Sama_1718	0.61	-2.0
2,104,216	+		Sama_1718	0.71	-0.8
2,104,266	+		Sama_1718	0.78	+0.5
2,104,266	+		Sama_1718	0.78	+0.0
2,104,311	+		Sama_1718	0.85	+0.2
2,104,317	+		Sama_1718	0.86	-0.2
2,104,317	+		Sama_1718	0.86	+2.2
2,104,318	-		Sama_1718	0.86	+0.5
2,104,323	+		Sama_1718	0.87	+1.0
2,104,323	+		Sama_1718	0.87	-0.2
2,104,323	+		Sama_1718	0.87	-0.2
2,104,335	+		Sama_1718	0.88	+0.2
2,104,371	-				+1.8
2,104,374	+				-0.6
2,104,411	+				-0.6
2,104,462	+				+0.2
2,104,497	+				-0.6
2,104,497	+				+3.8
2,104,497	+				+0.1
2,104,497	+				+1.4
2,104,502	+				+1.6