Strain Fitness in Shewanella amazonensis SB2B around Sama_1653

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
2,016,191	+				+2.3
2,016,191	+				-1.3
2,016,229	+				+1.5
2,016,230	-				+2.4
2,016,336	+		Sama_1651	0.44	+0.3
2,016,337	-		Sama_1651	0.44	-1.8
2,016,370	-		Sama_1651	0.57	-1.7
2,016,379	+		Sama_1651	0.60	-1.0
2,016,380	-		Sama_1651	0.61	-1.8
2,016,476	+				+1.7
2,016,495	+				+0.5
2,016,637	+		Sama_1652	0.23	-0.6
2,016,637	+		Sama_1652	0.23	+1.1
2,016,637	+		Sama_1652	0.23	+0.0
2,016,638	-		Sama_1652	0.23	+1.1
2,016,638	-		Sama_1652	0.23	+0.0
2,016,638	-		Sama_1652	0.23	+0.4
2,016,660	-		Sama_1652	0.29	-0.5
2,016,716	-		Sama_1652	0.43	+1.8
2,016,758	+		Sama_1652	0.53	+0.9
2,016,836	-		Sama_1652	0.73	-0.6
2,017,004	+				+0.2
2,017,016	+				-0.3
2,017,016	+				+1.4
2,017,017	-				-1.4
2,017,089	+				-0.3
2,017,090	-				-1.0
2,017,091	+				+0.7
2,017,091	+				-0.2
2,017,091	+				+0.0
2,017,091	+				+0.2
2,017,091	+				+0.7
2,017,092	-				+0.2
2,017,092	-				+1.2
2,017,092	-				-0.5
2,017,092	-				-1.0
2,017,163	-				+0.5
2,017,204	+				+0.5
2,017,204	+				+0.0
2,017,204	+				+0.2
2,017,205	-				-1.6
2,017,205	-				+0.2
2,017,205	-				-1.2
2,017,391	+		Sama_1653	0.19	-0.5
2,017,392	-		Sama_1653	0.19	+0.5
2,017,661	+		Sama_1653	0.35	+1.5
2,017,662	-		Sama_1653	0.35	-0.6
2,017,727	+		Sama_1653	0.40	-1.1
2,017,924	+		Sama_1653	0.52	-1.1
2,017,925	-		Sama_1653	0.52	-1.7
2,017,928	+		Sama_1653	0.52	-0.4
2,017,928	+		Sama_1653	0.52	-1.2
2,017,933	+		Sama_1653	0.52	-0.5
2,017,957	+		Sama_1653	0.54	+0.5
2,017,979	+		Sama_1653	0.55	+0.2
2,018,065	+		Sama_1653	0.60	-0.3
2,018,077	+		Sama_1653	0.61	+2.4
2,018,077	+		Sama_1653	0.61	+1.1
2,018,077	+		Sama_1653	0.61	+0.8
2,018,077	+		Sama_1653	0.61	-0.8
2,018,080	+		Sama_1653	0.61	-0.2
2,018,081	-		Sama_1653	0.61	+0.1
2,018,081	-		Sama_1653	0.61	+0.0
2,018,134	+		Sama_1653	0.65	+0.0
2,018,135	-		Sama_1653	0.65	-2.0
2,018,146	+		Sama_1653	0.65	-0.2
2,018,146	+		Sama_1653	0.65	-0.1
2,018,146	+		Sama_1653	0.65	-0.3
2,018,285	+		Sama_1653	0.74	+0.2
2,018,419	+		Sama_1653	0.82	+0.8
2,018,419	+		Sama_1653	0.82	-2.0
2,018,419	+		Sama_1653	0.82	-0.3
2,018,419	+		Sama_1653	0.82	+0.5
2,018,420	-		Sama_1653	0.82	+0.6
2,018,420	-		Sama_1653	0.82	+0.8
2,018,420	-		Sama_1653	0.82	+0.1
2,018,425	-		Sama_1653	0.83	-1.4
2,018,455	+		Sama_1653	0.85	+0.9
2,018,455	+		Sama_1653	0.85	-0.3
2,018,528	+		Sama_1653	0.89	-1.3
2,018,595	+				+3.3
2,018,595	+				-2.0
2,018,595	+				+0.2
2,018,595	+				+1.1
2,018,595	+				-0.8
2,018,596	-				-0.2
2,018,596	-				+0.5
2,018,596	-				-0.4
2,018,611	+				-0.3
2,018,612	-				-0.5
2,018,672	+				+1.1
2,018,673	-				+0.0
2,018,740	+				-0.3
2,018,747	+				+0.5
2,018,747	+				-1.0
2,018,747	+				+0.7
2,018,747	+				-1.2
2,018,747	+				-1.2
2,018,751	+				-1.3
2,018,751	+				+0.0
2,018,751	+				+0.0
2,018,751	+				+0.1
2,018,751	+				+0.5
2,018,751	+				+0.9
2,018,751	+				+2.3
2,018,751	+				+0.0
2,018,752	-				+0.9
2,018,752	-				-0.3
2,018,752	-				-0.1
2,018,752	-				+0.5
2,018,752	-				+0.8
2,018,865	+				+0.5
2,018,865	+				-0.2
2,018,865	+				+2.8
2,018,866	-				+3.2
2,018,872	+				-1.0
2,018,872	+				+0.2
2,018,872	+				+1.8
2,018,872	+				+0.5
2,018,872	+				+0.8
2,018,873	-				+0.0
2,018,873	-				-0.3
2,018,873	-				-0.2
2,018,873	-				-1.5
2,018,875	-				-0.5
2,019,023	+				+0.4
2,019,023	+				-1.6
2,019,024	-				+1.5
2,019,024	-				+0.0
2,019,027	+				-1.3
2,019,027	+				+0.8
2,019,028	-				-0.8
2,019,028	-				-1.1
2,019,041	+				-1.3
2,019,041	+				+0.2
2,019,041	+				-0.9
2,019,041	+				+0.5
2,019,041	+				+2.1
2,019,042	-				+0.2
2,019,042	-				+0.9
2,019,126	+		Sama_1654	0.17	+1.1
2,019,144	-		Sama_1654	0.20	-0.9
2,019,244	+		Sama_1654	0.34	-0.2
2,019,244	+		Sama_1654	0.34	-1.0
2,019,246	+		Sama_1654	0.35	+2.0
2,019,246	+		Sama_1654	0.35	+0.9
2,019,246	+		Sama_1654	0.35	-0.4
2,019,247	-		Sama_1654	0.35	-1.1
2,019,247	-		Sama_1654	0.35	+2.3
2,019,328	-		Sama_1654	0.47	+0.8
2,019,483	+		Sama_1654	0.69	+1.2
2,019,484	-		Sama_1654	0.69	+0.8
2,019,647	+				-0.1
2,019,647	+				-0.4
2,019,648	-				-1.0
2,019,691	+				+0.0
2,019,704	+				+1.4