Strain Fitness in Shewanella amazonensis SB2B around Sama_1618

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,979,615	+		Sama_1617	0.19	+0.2
1,979,616	-		Sama_1617	0.19	-0.5
1,979,621	+		Sama_1617	0.20	+0.5
1,979,621	+		Sama_1617	0.20	+0.2
1,979,622	-		Sama_1617	0.20	-0.0
1,979,646	-		Sama_1617	0.22	-0.8
1,979,668	-		Sama_1617	0.24	+0.5
1,979,668	-		Sama_1617	0.24	+0.8
1,979,747	+		Sama_1617	0.33	-0.2
1,979,747	+		Sama_1617	0.33	-0.8
1,979,748	-		Sama_1617	0.33	+0.1
1,979,748	-		Sama_1617	0.33	+0.2
1,979,793	-		Sama_1617	0.37	-0.1
1,979,989	-		Sama_1617	0.57	+0.3
1,979,989	-		Sama_1617	0.57	+0.2
1,980,086	+		Sama_1617	0.67	-1.4
1,980,086	+		Sama_1617	0.67	+2.0
1,980,120	+		Sama_1617	0.70	-1.5
1,980,120	+		Sama_1617	0.70	+0.2
1,980,168	+		Sama_1617	0.75	-0.2
1,980,169	-		Sama_1617	0.75	-0.3
1,980,169	-		Sama_1617	0.75	+0.2
1,980,181	-		Sama_1617	0.77	-1.5
1,980,216	+		Sama_1617	0.80	+1.5
1,980,216	+		Sama_1617	0.80	+4.4
1,980,216	+		Sama_1617	0.80	-1.6
1,980,217	-		Sama_1617	0.80	-0.9
1,980,335	+				-0.5
1,980,335	+				+0.6
1,980,339	-				-0.4
1,980,352	-				+0.3
1,980,367	+				+0.8
1,980,371	+				+0.4
1,980,371	+				-0.2
1,980,372	-				+0.2
1,980,372	-				-1.1
1,980,462	-				+0.5
1,980,475	-				+3.3
1,980,475	-				-0.8
1,980,507	+				-0.1
1,980,507	+				-0.5
1,980,522	+				+0.2
1,980,522	+				-0.4
1,980,523	-				+0.5
1,980,523	-				-2.0
1,980,555	+		Sama_1618	0.14	-1.2
1,980,555	+		Sama_1618	0.14	-0.5
1,980,555	+		Sama_1618	0.14	-1.4
1,980,555	+		Sama_1618	0.14	-1.8
1,980,556	-		Sama_1618	0.14	+0.5
1,980,556	-		Sama_1618	0.14	+1.8
1,980,556	-		Sama_1618	0.14	-1.5
1,980,617	+		Sama_1618	0.29	+0.5
1,980,617	+		Sama_1618	0.29	+0.3
1,980,621	+		Sama_1618	0.30	-0.8
1,980,621	+		Sama_1618	0.30	-1.4
1,980,621	+		Sama_1618	0.30	+2.5
1,980,621	+		Sama_1618	0.30	-0.9
1,980,621	+		Sama_1618	0.30	+0.8
1,980,622	-		Sama_1618	0.30	+0.1
1,980,688	+		Sama_1618	0.46	-1.4
1,980,688	+		Sama_1618	0.46	-1.5
1,980,688	+		Sama_1618	0.46	-1.7
1,980,688	+		Sama_1618	0.46	+0.8
1,980,689	-		Sama_1618	0.46	+0.8
1,980,689	-		Sama_1618	0.46	+0.5
1,980,689	-		Sama_1618	0.46	+0.5
1,980,689	-		Sama_1618	0.46	-0.0
1,980,702	-		Sama_1618	0.49	+4.1
1,980,746	+		Sama_1618	0.60	+1.2
1,980,880	+				+0.1
1,980,880	+				+0.6
1,980,880	+				+0.9
1,980,880	+				-0.5
1,980,880	+				-0.3
1,980,881	-				+1.5
1,980,881	-				-1.4
1,980,881	-				-0.8
1,980,882	+				-0.0
1,980,896	-				-1.2
1,980,925	-				+0.5
1,980,986	+				-0.5
1,980,986	+				-1.6
1,980,986	+				+1.2
1,980,987	-				-0.8
1,981,059	+				-0.0
1,981,060	-				-0.8
1,981,060	-				-0.7
1,981,060	-				+1.8
1,981,060	-				-1.1
1,981,063	+				-0.5
1,981,095	-				-0.4
1,981,117	+				-1.9
1,981,117	+				-1.0
1,981,118	-				-0.0
1,981,521	+		Sama_1619	0.13	+0.8
1,981,521	+		Sama_1619	0.13	-1.4
1,981,521	+		Sama_1619	0.13	-1.8
1,981,523	+		Sama_1619	0.13	+0.5
1,981,524	-		Sama_1619	0.13	+0.2
1,981,524	-		Sama_1619	0.13	+0.7
1,981,572	-		Sama_1619	0.14	-0.3
1,981,576	-		Sama_1619	0.14	-0.0
1,981,587	+		Sama_1619	0.14	-0.9
1,981,588	-		Sama_1619	0.15	-0.5
1,981,599	-		Sama_1619	0.15	-1.0
1,981,641	-		Sama_1619	0.16	-0.9
1,981,650	+		Sama_1619	0.16	-0.2
1,981,651	-		Sama_1619	0.16	+0.1
1,981,654	+		Sama_1619	0.16	-0.0
1,981,654	+		Sama_1619	0.16	+3.8
1,981,834	+		Sama_1619	0.21	+0.5