Strain Fitness in Shewanella amazonensis SB2B around Sama_1492

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,805,053	+		Sama_1491	0.12	+1.3
1,805,174	+		Sama_1491	0.25	+1.5
1,805,174	+		Sama_1491	0.25	+0.7
1,805,174	+		Sama_1491	0.25	-0.6
1,805,174	+		Sama_1491	0.25	-1.3
1,805,174	+		Sama_1491	0.25	-1.1
1,805,174	+		Sama_1491	0.25	+0.8
1,805,174	+		Sama_1491	0.25	+0.8
1,805,175	-		Sama_1491	0.25	+0.8
1,805,175	-		Sama_1491	0.25	+1.5
1,805,176	+		Sama_1491	0.26	+1.4
1,805,176	+		Sama_1491	0.26	+1.1
1,805,177	-		Sama_1491	0.26	+0.1
1,805,182	+		Sama_1491	0.26	+0.6
1,805,262	+		Sama_1491	0.35	+2.7
1,805,262	+		Sama_1491	0.35	-2.1
1,805,304	-		Sama_1491	0.39	+0.4
1,805,336	+		Sama_1491	0.43	-0.2
1,805,337	-		Sama_1491	0.43	-0.5
1,805,337	-		Sama_1491	0.43	+1.9
1,805,364	-		Sama_1491	0.46	+0.9
1,805,380	+		Sama_1491	0.48	-1.2
1,805,381	-		Sama_1491	0.48	+0.7
1,805,429	+		Sama_1491	0.53	-1.2
1,805,535	+		Sama_1491	0.64	+0.9
1,805,536	-		Sama_1491	0.64	+1.6
1,805,536	-		Sama_1491	0.64	-0.8
1,805,567	-		Sama_1491	0.68	-0.1
1,805,630	-		Sama_1491	0.75	+0.7
1,805,630	-		Sama_1491	0.75	+1.7
1,805,640	-		Sama_1491	0.76	-1.1
1,805,640	-		Sama_1491	0.76	+1.8
1,805,687	+		Sama_1491	0.81	+4.1
1,805,687	+		Sama_1491	0.81	+0.8
1,805,688	-		Sama_1491	0.81	+0.6
1,805,773	-				-0.5
1,805,773	-				+0.6
1,805,773	-				+1.0
1,805,845	-				-0.9
1,805,916	+				-0.0
1,805,922	+				-0.6
1,805,923	-				+0.6
1,805,923	-				-0.8
1,806,011	-				+1.7
1,806,027	+		Sama_1492	0.12	-0.8
1,806,028	-		Sama_1492	0.12	+1.0
1,806,109	-		Sama_1492	0.49	+3.0
1,806,110	-		Sama_1492	0.50	+0.8
1,806,110	-		Sama_1492	0.50	+1.7
1,806,172	+		Sama_1492	0.78	+0.5
1,806,173	-		Sama_1492	0.79	-0.1
1,806,173	-		Sama_1492	0.79	+0.7
1,806,173	-		Sama_1492	0.79	+1.7
1,806,175	-		Sama_1492	0.79	-0.9
1,806,175	-		Sama_1492	0.79	-0.6
1,806,219	+				+1.7
1,806,219	+				+2.2
1,806,245	+				+0.7
1,806,250	-				+0.1
1,806,414	+				+0.7
1,806,415	-				+1.4
1,806,498	-				-0.3
1,806,542	+				-0.2
1,806,562	+				-0.5
1,806,599	+				-1.2
1,806,599	+				+0.4
1,806,600	-				-0.9
1,806,693	+				-0.9
1,806,693	+				-1.7
1,806,693	+				+1.7
1,806,696	+				+0.1
1,806,696	+				+1.2
1,806,696	+				-1.9
1,806,696	+				+2.3
1,806,697	-				-1.0
1,806,697	-				+1.1
1,806,806	+				-1.3
1,806,931	-		Sama_1493	0.17	-0.1
1,806,975	+		Sama_1493	0.27	-0.8
1,806,976	-		Sama_1493	0.27	-1.4
1,807,076	+		Sama_1493	0.50	-0.3
1,807,077	-		Sama_1493	0.50	+0.4
1,807,100	+		Sama_1493	0.55	+0.2
1,807,100	+		Sama_1493	0.55	+1.1
1,807,174	+		Sama_1493	0.72	-0.4
1,807,174	+		Sama_1493	0.72	+1.9
1,807,174	+		Sama_1493	0.72	-0.1
1,807,175	-		Sama_1493	0.72	-0.6
1,807,175	-		Sama_1493	0.72	+1.8