Strain Fitness in Shewanella amazonensis SB2B around Sama_1490

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,802,788	+		Sama_1488	0.45	-0.7
1,802,789	-		Sama_1488	0.45	-0.9
1,802,804	-		Sama_1488	0.47	-1.0
1,802,872	+		Sama_1488	0.55	-2.1
1,802,928	+		Sama_1488	0.61	-1.4
1,802,928	+		Sama_1488	0.61	+1.4
1,802,932	-		Sama_1488	0.61	-1.0
1,803,068	+		Sama_1488	0.77	+0.3
1,803,141	+		Sama_1488	0.85	+0.5
1,803,142	-		Sama_1488	0.85	-0.1
1,803,161	+		Sama_1488	0.87	+3.1
1,803,161	+		Sama_1488	0.87	+1.3
1,803,241	+				+1.1
1,803,241	+				+1.7
1,803,242	-				+0.1
1,803,242	-				-1.0
1,803,263	+				-0.4
1,803,264	-				-0.3
1,803,266	+				+0.2
1,803,267	-				+1.7
1,803,267	-				-1.7
1,803,267	-				+2.1
1,803,267	-				+0.7
1,803,267	-				-0.2
1,803,274	+				+0.0
1,803,275	-				+1.1
1,803,275	-				-0.5
1,803,300	+				-1.0
1,803,300	+				+0.1
1,803,301	-				+1.1
1,803,301	-				-0.8
1,803,301	-				-0.3
1,803,308	+				-0.1
1,803,308	+				-0.1
1,803,308	+				+0.2
1,803,309	-				-0.3
1,803,309	-				-1.9
1,803,309	-				+1.0
1,803,309	-				+0.3
1,803,309	-				-1.4
1,803,309	-				-1.4
1,803,309	-				+1.6
1,803,309	-				+0.9
1,803,309	-				+0.3
1,803,310	+				+0.3
1,803,310	+				+0.4
1,803,311	-				-1.0
1,803,319	+				-1.2
1,803,319	+				-0.8
1,803,319	+				+0.7
1,803,319	+				+2.9
1,803,320	-				-1.9
1,803,320	-				+1.4
1,803,320	-				+0.2
1,803,325	+				+0.1
1,803,325	+				+3.0
1,803,326	-				-1.1
1,803,326	-				+0.6
1,803,605	+	folX	Sama_1489	0.74	+1.9
1,803,864	+				-0.2
1,803,864	+				-0.6
1,803,909	+		Sama_1490	0.12	-1.3
1,803,910	-		Sama_1490	0.12	+0.3
1,804,073	-		Sama_1490	0.27	+1.1
1,804,127	+		Sama_1490	0.32	-1.2
1,804,128	-		Sama_1490	0.32	-0.1
1,804,263	+		Sama_1490	0.45	-2.4
1,804,263	+		Sama_1490	0.45	-0.5
1,804,264	-		Sama_1490	0.45	-1.1
1,804,264	-		Sama_1490	0.45	+1.7
1,804,264	-		Sama_1490	0.45	-0.5
1,804,264	-		Sama_1490	0.45	-0.4
1,804,268	+		Sama_1490	0.45	-1.6
1,804,269	-		Sama_1490	0.45	-0.1
1,804,369	+		Sama_1490	0.55	-1.0
1,804,369	+		Sama_1490	0.55	+1.7
1,804,369	+		Sama_1490	0.55	-2.2
1,804,369	+		Sama_1490	0.55	-1.4
1,804,369	+		Sama_1490	0.55	-0.9
1,804,369	+		Sama_1490	0.55	+0.4
1,804,370	-		Sama_1490	0.55	-1.1
1,804,370	-		Sama_1490	0.55	-1.0
1,804,370	-		Sama_1490	0.55	+0.4
1,804,370	-		Sama_1490	0.55	+0.7
1,804,371	+		Sama_1490	0.55	-0.4
1,804,371	+		Sama_1490	0.55	-0.6
1,804,371	+		Sama_1490	0.55	+0.8
1,804,372	-		Sama_1490	0.55	-0.1
1,804,372	-		Sama_1490	0.55	+0.1
1,804,372	-		Sama_1490	0.55	+0.9
1,804,372	-		Sama_1490	0.55	-0.5
1,804,372	-		Sama_1490	0.55	-1.0
1,804,372	-		Sama_1490	0.55	-0.5
1,804,380	+		Sama_1490	0.56	-0.3
1,804,380	+		Sama_1490	0.56	-0.5
1,804,380	+		Sama_1490	0.56	+1.7
1,804,381	-		Sama_1490	0.56	+1.7
1,804,416	-		Sama_1490	0.59	+1.1
1,804,434	+		Sama_1490	0.61	+0.9
1,804,447	+		Sama_1490	0.62	+0.4
1,804,447	+		Sama_1490	0.62	+1.9
1,804,447	+		Sama_1490	0.62	-0.5
1,804,448	-		Sama_1490	0.62	-1.5
1,804,486	+		Sama_1490	0.65	-0.3
1,804,486	+		Sama_1490	0.65	-1.4
1,804,487	-		Sama_1490	0.66	+0.5
1,804,487	-		Sama_1490	0.66	+0.4
1,804,487	-		Sama_1490	0.66	+2.7
1,804,487	-		Sama_1490	0.66	-0.4
1,804,542	+		Sama_1490	0.71	-2.0
1,804,542	+		Sama_1490	0.71	+0.1
1,804,542	+		Sama_1490	0.71	+0.1
1,804,585	+		Sama_1490	0.75	-1.6
1,804,585	+		Sama_1490	0.75	-2.0
1,804,586	-		Sama_1490	0.75	-1.3
1,804,586	-		Sama_1490	0.75	-0.8
1,804,599	+		Sama_1490	0.76	-0.5
1,804,599	+		Sama_1490	0.76	-1.4
1,804,599	+		Sama_1490	0.76	-0.9
1,804,682	+		Sama_1490	0.84	-0.3
1,804,713	+		Sama_1490	0.87	-1.7
1,804,790	+				+1.5
1,804,791	-				+1.2
1,804,901	+				+0.1
1,804,915	+				-0.1
1,804,915	+				+0.7
1,804,951	-				-1.2
1,804,976	+				-0.3
1,805,053	+		Sama_1491	0.12	+1.3
1,805,174	+		Sama_1491	0.25	+1.5
1,805,174	+		Sama_1491	0.25	+0.7
1,805,174	+		Sama_1491	0.25	-0.6
1,805,174	+		Sama_1491	0.25	-1.3
1,805,174	+		Sama_1491	0.25	-1.1
1,805,174	+		Sama_1491	0.25	+0.8
1,805,174	+		Sama_1491	0.25	+0.8
1,805,175	-		Sama_1491	0.25	+0.8
1,805,175	-		Sama_1491	0.25	+1.5
1,805,176	+		Sama_1491	0.26	+1.4
1,805,176	+		Sama_1491	0.26	+1.1
1,805,177	-		Sama_1491	0.26	+0.1
1,805,182	+		Sama_1491	0.26	+0.6
1,805,262	+		Sama_1491	0.35	+2.7
1,805,262	+		Sama_1491	0.35	-2.1
1,805,304	-		Sama_1491	0.39	+0.4
1,805,336	+		Sama_1491	0.43	-0.2
1,805,337	-		Sama_1491	0.43	-0.5
1,805,337	-		Sama_1491	0.43	+1.9
1,805,364	-		Sama_1491	0.46	+0.9
1,805,380	+		Sama_1491	0.48	-1.2
1,805,381	-		Sama_1491	0.48	+0.7
1,805,429	+		Sama_1491	0.53	-1.2
1,805,535	+		Sama_1491	0.64	+0.9
1,805,536	-		Sama_1491	0.64	+1.6
1,805,536	-		Sama_1491	0.64	-0.8
1,805,567	-		Sama_1491	0.68	-0.1
1,805,630	-		Sama_1491	0.75	+0.7
1,805,630	-		Sama_1491	0.75	+1.7
1,805,640	-		Sama_1491	0.76	-1.1
1,805,640	-		Sama_1491	0.76	+1.8
1,805,687	+		Sama_1491	0.81	+4.1
1,805,687	+		Sama_1491	0.81	+0.8
1,805,688	-		Sama_1491	0.81	+0.6
1,805,773	-				-0.5
1,805,773	-				+0.6
1,805,773	-				+1.0
1,805,845	-				-0.9