Strain Fitness in Shewanella amazonensis SB2B around Sama_1389

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,679,860	+				-1.3
1,679,860	+				-1.2
1,679,883	+				-1.2
1,679,958	+		Sama_1388	0.16	-1.0
1,679,959	-		Sama_1388	0.16	-1.6
1,680,133	+		Sama_1388	0.36	+0.6
1,680,133	+		Sama_1388	0.36	+0.8
1,680,133	+		Sama_1388	0.36	-1.1
1,680,134	-		Sama_1388	0.36	+0.8
1,680,134	-		Sama_1388	0.36	-0.2
1,680,134	-		Sama_1388	0.36	+1.9
1,680,134	-		Sama_1388	0.36	+1.2
1,680,134	-		Sama_1388	0.36	-0.4
1,680,368	-		Sama_1388	0.62	-0.0
1,680,596	+		Sama_1388	0.87	-0.0
1,680,657	+				-1.2
1,680,708	+				+0.3
1,680,741	-				-1.6
1,680,782	-				-0.2
1,680,824	+				-0.0
1,680,824	+				-0.4
1,680,824	+				-1.3
1,680,825	-				+1.6
1,680,825	-				+0.1
1,680,854	+				-1.4
1,680,854	+				-0.2
1,680,855	-				-0.3
1,680,881	-				-0.5
1,680,932	+		Sama_1389	0.17	-1.1
1,680,932	+		Sama_1389	0.17	+1.0
1,680,933	-		Sama_1389	0.18	-0.2
1,680,938	+		Sama_1389	0.19	-1.2
1,680,995	+		Sama_1389	0.32	-0.3
1,681,018	+		Sama_1389	0.37	-0.0
1,681,019	-		Sama_1389	0.37	-0.6
1,681,182	-		Sama_1389	0.74	+3.3
1,681,190	+		Sama_1389	0.76	+2.6
1,681,190	+		Sama_1389	0.76	-0.8
1,681,191	-		Sama_1389	0.76	+0.3
1,681,393	-		Sama_1390	0.13	-0.0
1,681,393	-		Sama_1390	0.13	-0.9
1,681,393	-		Sama_1390	0.13	-0.4
1,681,431	-		Sama_1390	0.18	-1.6
1,681,498	+		Sama_1390	0.28	+0.2
1,681,498	+		Sama_1390	0.28	+0.8
1,681,498	+		Sama_1390	0.28	+1.0
1,681,498	+		Sama_1390	0.28	-2.0
1,681,499	-		Sama_1390	0.28	-0.9
1,681,503	+		Sama_1390	0.28	+1.2
1,681,503	+		Sama_1390	0.28	+1.9
1,681,503	+		Sama_1390	0.28	+0.8
1,681,600	+		Sama_1390	0.42	-1.6
1,681,600	+		Sama_1390	0.42	+0.9
1,681,600	+		Sama_1390	0.42	-1.3
1,681,601	-		Sama_1390	0.43	+1.1
1,681,601	-		Sama_1390	0.43	-1.8
1,681,614	+		Sama_1390	0.44	+0.1
1,681,615	-		Sama_1390	0.45	-0.3
1,681,693	-		Sama_1390	0.56	+2.2
1,681,791	+		Sama_1390	0.70	-0.8
1,681,792	-		Sama_1390	0.70	+0.2
1,681,994	-				+0.3
1,682,042	+				-0.6
1,682,042	+				+1.1
1,682,043	-				-0.0
1,682,065	+				-0.1
1,682,066	-				+0.2
1,682,170	+				-1.1
1,682,170	+				-0.2
1,682,170	+				-0.1
1,682,170	+				-0.4
1,682,171	-				+0.7
1,682,171	-				+0.6
1,682,171	-				-1.3
1,682,171	-				-0.5
1,682,171	-				-0.6
1,682,171	-				+0.5
1,682,171	-				+0.2
1,682,171	-				-1.1
1,682,238	-		Sama_1391	0.11	-0.8
1,682,283	-		Sama_1391	0.19	-0.8