Strain Fitness in Shewanella amazonensis SB2B around Sama_1387

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,678,488	+		Sama_1386	0.57	+1.3
1,678,488	+		Sama_1386	0.57	-1.1
1,678,488	+		Sama_1386	0.57	-0.7
1,678,537	+		Sama_1386	0.60	-1.2
1,678,662	-		Sama_1386	0.68	+0.2
1,678,662	-		Sama_1386	0.68	+0.1
1,678,731	+		Sama_1386	0.73	-1.2
1,678,731	+		Sama_1386	0.73	-1.4
1,678,732	-		Sama_1386	0.73	-0.9
1,678,844	+		Sama_1386	0.80	-1.3
1,678,844	+		Sama_1386	0.80	-0.0
1,678,844	+		Sama_1386	0.80	-0.8
1,678,886	-		Sama_1386	0.82	-1.4
1,678,946	+		Sama_1386	0.86	-0.4
1,678,991	+		Sama_1386	0.89	-1.7
1,679,030	+				-1.8
1,679,130	+				-0.9
1,679,150	+				+1.6
1,679,236	+				+1.2
1,679,282	+				-1.5
1,679,282	+				-0.4
1,679,282	+				-0.6
1,679,283	-				+0.2
1,679,283	-				+0.4
1,679,313	+				-0.6
1,679,313	+				+0.4
1,679,314	-				+2.0
1,679,314	-				-0.4
1,679,378	+				-0.4
1,679,379	-				-1.3
1,679,379	-				+1.4
1,679,411	+		Sama_1387	0.17	+1.0
1,679,428	+		Sama_1387	0.22	-0.2
1,679,505	-		Sama_1387	0.42	-0.4
1,679,666	+		Sama_1387	0.84	+1.6
1,679,666	+		Sama_1387	0.84	-0.8
1,679,667	-		Sama_1387	0.85	+4.2
1,679,682	+		Sama_1387	0.88	-0.2
1,679,723	+				-0.4
1,679,723	+				-0.2
1,679,723	+				-0.2
1,679,723	+				+0.5
1,679,723	+				-0.8
1,679,723	+				-0.8
1,679,724	-				-1.5
1,679,777	+				+1.9
1,679,795	+				-0.5
1,679,795	+				+0.2
1,679,795	+				+0.8
1,679,796	-				-0.3
1,679,796	-				+0.4
1,679,796	-				-0.8
1,679,796	-				-1.1
1,679,816	+				+0.6
1,679,816	+				-1.8
1,679,816	+				-0.4
1,679,816	+				-0.8
1,679,816	+				-0.2
1,679,816	+				+0.0
1,679,817	-				+0.5
1,679,817	-				-1.8
1,679,817	-				-1.1
1,679,817	-				-1.1
1,679,817	-				+1.4
1,679,817	-				+0.2
1,679,817	-				+0.7
1,679,818	+				-1.3
1,679,818	+				-0.0
1,679,818	+				+1.2
1,679,818	+				-0.2
1,679,818	+				+1.0
1,679,818	+				+0.1
1,679,818	+				+0.7
1,679,818	+				+0.2
1,679,819	-				+0.6
1,679,819	-				-0.6
1,679,819	-				+0.2
1,679,819	-				+0.1
1,679,819	-				+0.2
1,679,819	-				-0.0
1,679,819	-				-0.7
1,679,819	-				+0.1
1,679,820	+				+1.2
1,679,821	-				-2.1
1,679,835	+				-0.6
1,679,835	+				+0.1
1,679,836	-				+0.6
1,679,839	+				+1.0
1,679,839	+				-0.9
1,679,839	+				+0.6
1,679,839	+				+0.8
1,679,839	+				+1.0
1,679,839	+				-0.2
1,679,839	+				-0.2
1,679,840	-				-0.2
1,679,840	-				+0.7
1,679,840	-				+0.6
1,679,840	-				-1.7
1,679,840	-				+2.1
1,679,860	+				-1.3
1,679,860	+				-1.2
1,679,883	+				-1.2
1,679,958	+		Sama_1388	0.16	-1.0
1,679,959	-		Sama_1388	0.16	-1.6
1,680,133	+		Sama_1388	0.36	+0.6
1,680,133	+		Sama_1388	0.36	+0.8
1,680,133	+		Sama_1388	0.36	-1.1
1,680,134	-		Sama_1388	0.36	+0.8
1,680,134	-		Sama_1388	0.36	-0.2
1,680,134	-		Sama_1388	0.36	+1.9
1,680,134	-		Sama_1388	0.36	+1.2
1,680,134	-		Sama_1388	0.36	-0.4
1,680,368	-		Sama_1388	0.62	-0.0
1,680,596	+		Sama_1388	0.87	-0.0
1,680,657	+				-1.2
1,680,708	+				+0.3