Strain Fitness in Shewanella amazonensis SB2B around Sama_1297

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,584,309	+				-1.7
1,584,309	+				+0.1
1,584,309	+				-0.2
1,584,309	+				+0.8
1,584,309	+				-1.6
1,584,309	+				+0.4
1,584,309	+				-1.0
1,584,309	+				+1.4
1,584,309	+				-1.1
1,584,309	+				-1.9
1,584,309	+				+1.7
1,584,309	+				-0.1
1,584,311	+				+2.2
1,584,658	-				-1.0
1,584,690	+				-1.7
1,584,722	+				-2.1
1,584,722	+				-0.8
1,584,722	+				-1.7
1,584,722	+				-0.9
1,584,722	+				-0.7
1,584,722	+				-0.9
1,584,722	+				+0.5
1,584,723	-				-1.0
1,584,723	-				-0.3
1,584,723	-				-0.7
1,584,726	+				-0.2
1,584,726	+				+0.7
1,584,727	-				-0.4
1,584,727	-				-1.3
1,584,727	-				+0.9
1,584,769	+				+0.7
1,584,782	+				+0.8
1,584,853	+				+1.1
1,584,853	+				-1.1
1,584,854	-				+0.3
1,584,854	-				-0.9
1,584,854	-				-1.2
1,584,854	-				-0.8
1,584,854	-				-0.7
1,584,912	+		Sama_1299	0.10	+0.3
1,584,928	+		Sama_1299	0.12	-2.1
1,584,928	+		Sama_1299	0.12	-1.9
1,584,929	-		Sama_1299	0.12	-0.7
1,584,930	+		Sama_1299	0.12	-0.5
1,584,930	+		Sama_1299	0.12	+0.6
1,584,930	+		Sama_1299	0.12	-1.4
1,584,930	+		Sama_1299	0.12	+0.6
1,584,930	+		Sama_1299	0.12	+0.4
1,584,931	-		Sama_1299	0.13	-0.2
1,584,931	-		Sama_1299	0.13	+0.8
1,584,931	-		Sama_1299	0.13	+1.4
1,584,931	-		Sama_1299	0.13	+0.1
1,584,931	-		Sama_1299	0.13	-2.4
1,584,942	+		Sama_1299	0.14	-1.2
1,584,942	+		Sama_1299	0.14	-2.2
1,584,943	-		Sama_1299	0.14	-0.2
1,584,943	-		Sama_1299	0.14	-1.3
1,584,943	-		Sama_1299	0.14	-0.8
1,584,984	+		Sama_1299	0.18	+1.1
1,585,030	+		Sama_1299	0.24	-0.7
1,585,030	+		Sama_1299	0.24	-0.7
1,585,030	+		Sama_1299	0.24	-0.4
1,585,072	+		Sama_1299	0.28	-1.6
1,585,072	+		Sama_1299	0.28	-0.7
1,585,072	+		Sama_1299	0.28	-1.9
1,585,072	+		Sama_1299	0.28	-1.9
1,585,072	+		Sama_1299	0.28	-1.0
1,585,072	+		Sama_1299	0.28	+2.1
1,585,073	-		Sama_1299	0.28	-0.8
1,585,073	-		Sama_1299	0.28	-1.6
1,585,073	-		Sama_1299	0.28	+2.2
1,585,073	-		Sama_1299	0.28	+1.4
1,585,073	-		Sama_1299	0.28	-0.7
1,585,073	-		Sama_1299	0.28	-0.4
1,585,073	-		Sama_1299	0.28	-0.9
1,585,073	-		Sama_1299	0.28	-0.4
1,585,074	+		Sama_1299	0.28	-0.0
1,585,075	-		Sama_1299	0.28	-0.6
1,585,079	+		Sama_1299	0.29	-2.0
1,585,079	+		Sama_1299	0.29	-0.4
1,585,080	-		Sama_1299	0.29	-1.7
1,585,118	+		Sama_1299	0.33	+0.8
1,585,118	+		Sama_1299	0.33	+1.4
1,585,118	+		Sama_1299	0.33	-1.0
1,585,118	+		Sama_1299	0.33	+0.4
1,585,118	+		Sama_1299	0.33	-2.4
1,585,118	+		Sama_1299	0.33	+1.0
1,585,118	+		Sama_1299	0.33	-0.3
1,585,118	+		Sama_1299	0.33	+1.0
1,585,118	+		Sama_1299	0.33	+0.7
1,585,118	+		Sama_1299	0.33	-2.1
1,585,118	+		Sama_1299	0.33	-2.3
1,585,119	-		Sama_1299	0.33	-1.9
1,585,119	-		Sama_1299	0.33	+0.4
1,585,151	+		Sama_1299	0.37	-2.0
1,585,151	+		Sama_1299	0.37	-0.9
1,585,151	+		Sama_1299	0.37	-2.6
1,585,152	-		Sama_1299	0.37	+2.1
1,585,152	-		Sama_1299	0.37	-0.2
1,585,152	-		Sama_1299	0.37	-0.2
1,585,152	-		Sama_1299	0.37	-1.0
1,585,236	+		Sama_1299	0.46	+0.8
1,585,236	+		Sama_1299	0.46	-2.2
1,585,237	-		Sama_1299	0.46	-0.2
1,585,237	-		Sama_1299	0.46	-1.4
1,585,237	-		Sama_1299	0.46	-0.4
1,585,237	-		Sama_1299	0.46	-2.3
1,585,237	-		Sama_1299	0.46	+0.4
1,585,237	-		Sama_1299	0.46	-0.6
1,585,262	+		Sama_1299	0.49	-1.0
1,585,262	+		Sama_1299	0.49	-2.2
1,585,262	+		Sama_1299	0.49	-0.7
1,585,262	+		Sama_1299	0.49	+0.3
1,585,262	+		Sama_1299	0.49	-0.4
1,585,263	-		Sama_1299	0.49	+0.8
1,585,263	-		Sama_1299	0.49	-1.3
1,585,263	-		Sama_1299	0.49	-1.3
1,585,263	-		Sama_1299	0.49	+1.3