Strain Fitness in Shewanella amazonensis SB2B around Sama_1273

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,559,692	+				-2.2
1,559,720	+		Sama_1271	0.13	-0.2
1,559,721	-		Sama_1271	0.14	+0.8
1,559,721	-		Sama_1271	0.14	-0.1
1,559,733	+		Sama_1271	0.16	+0.7
1,559,734	-		Sama_1271	0.16	+0.4
1,559,734	-		Sama_1271	0.16	-1.3
1,559,734	-		Sama_1271	0.16	+1.8
1,559,779	+		Sama_1271	0.25	+2.3
1,559,780	-		Sama_1271	0.26	-0.2
1,559,808	+		Sama_1271	0.31	-1.8
1,559,809	-		Sama_1271	0.31	+2.1
1,559,841	+		Sama_1271	0.38	-2.5
1,559,842	-		Sama_1271	0.38	-0.9
1,559,877	+		Sama_1271	0.45	-0.6
1,559,877	+		Sama_1271	0.45	+3.0
1,559,904	+		Sama_1271	0.50	+0.3
1,560,140	+				-0.4
1,560,141	-				-2.3
1,560,141	-				+0.7
1,560,141	-				+0.5
1,560,141	-				-0.6
1,560,184	+				+1.3
1,560,235	+		Sama_1272	0.20	+0.8
1,560,236	-		Sama_1272	0.20	-0.3
1,560,236	-		Sama_1272	0.20	-1.2
1,560,241	-		Sama_1272	0.21	-0.8
1,560,363	-		Sama_1272	0.49	+0.4
1,560,404	+		Sama_1272	0.59	+1.4
1,560,405	-		Sama_1272	0.59	+0.9
1,560,405	-		Sama_1272	0.59	+0.2
1,560,405	-		Sama_1272	0.59	-0.3
1,560,405	-		Sama_1272	0.59	+1.1
1,560,405	-		Sama_1272	0.59	-1.3
1,560,405	-		Sama_1272	0.59	-0.2
1,560,407	-		Sama_1272	0.59	+0.1
1,560,407	-		Sama_1272	0.59	-0.8
1,560,407	-		Sama_1272	0.59	+0.3
1,560,407	-		Sama_1272	0.59	-0.8
1,560,407	-		Sama_1272	0.59	-1.3
1,560,526	+		Sama_1272	0.87	+0.7
1,560,527	-		Sama_1272	0.87	+0.7
1,560,542	+				+1.2
1,560,576	+				-1.0
1,560,577	-				-0.2
1,560,577	-				-1.5
1,560,577	-				+0.8
1,560,577	-				+0.4
1,560,611	+				+0.1
1,560,611	+				-0.9
1,560,662	-				-0.1
1,562,120	+				+0.4
1,562,139	-				-1.2
1,562,204	-				+0.2
1,562,212	+				-1.0
1,562,212	+				+0.2
1,562,212	+				+2.4
1,562,296	+				-0.4
1,562,296	+				-1.5
1,562,296	+				+0.6
1,562,297	-				-0.0
1,562,297	-				+0.4
1,562,338	+				-0.8
1,562,339	-				-0.7
1,562,339	-				+0.7
1,562,378	-				-0.0
1,562,418	+				+0.5
1,562,422	+				-0.9
1,562,422	+				-0.5
1,562,422	+				+2.4
1,562,422	+				-1.0
1,562,423	-				+1.4
1,562,423	-				-0.4
1,562,423	-				+0.4
1,562,423	-				-0.8
1,562,423	-				+0.2
1,562,423	-				-0.4
1,562,426	+				+0.8
1,562,427	-				-0.8
1,562,427	-				+0.7
1,562,427	-				+0.7
1,562,442	+				+0.6
1,562,442	+				+0.1
1,562,442	+				-0.5
1,562,493	+				-2.3
1,562,494	-				+0.2
1,562,495	+				+0.1
1,562,496	-				+2.7
1,562,536	+				-0.4
1,562,537	-				-1.6
1,562,537	-				-1.5
1,562,583	+				+0.5
1,562,583	+				+0.2
1,562,686	+		Sama_1274	0.16	-1.0
1,562,686	+		Sama_1274	0.16	-0.1
1,562,686	+		Sama_1274	0.16	-1.0
1,562,686	+		Sama_1274	0.16	-1.4
1,562,686	+		Sama_1274	0.16	+0.1
1,562,686	+		Sama_1274	0.16	-0.9
1,562,687	-		Sama_1274	0.16	+2.8
1,562,687	-		Sama_1274	0.16	-1.2
1,562,687	-		Sama_1274	0.16	-1.8
1,562,687	-		Sama_1274	0.16	+1.1
1,562,687	-		Sama_1274	0.16	-0.5
1,562,765	+		Sama_1274	0.24	-1.9
1,562,765	+		Sama_1274	0.24	+1.8
1,562,765	+		Sama_1274	0.24	-0.8
1,562,765	+		Sama_1274	0.24	-1.6
1,562,766	-		Sama_1274	0.24	+0.6
1,562,766	-		Sama_1274	0.24	+1.4
1,562,813	+		Sama_1274	0.29	-0.8
1,562,813	+		Sama_1274	0.29	-0.2
1,562,865	+		Sama_1274	0.35	+1.2
1,562,887	+		Sama_1274	0.37	-1.5
1,562,887	+		Sama_1274	0.37	-1.0
1,562,887	+		Sama_1274	0.37	-1.4
1,562,887	+		Sama_1274	0.37	+0.4
1,562,887	+		Sama_1274	0.37	+0.2
1,562,888	-		Sama_1274	0.37	-0.9
1,562,888	-		Sama_1274	0.37	+0.1
1,562,888	-		Sama_1274	0.37	+1.7
1,562,963	+		Sama_1274	0.45	-1.8
1,562,964	-		Sama_1274	0.45	+0.3
1,563,000	-		Sama_1274	0.49	-2.7
1,563,011	+		Sama_1274	0.50	-0.8
1,563,012	-		Sama_1274	0.51	+0.9
1,563,012	-		Sama_1274	0.51	-0.4
1,563,015	+		Sama_1274	0.51	-0.6
1,563,015	+		Sama_1274	0.51	-0.3
1,563,015	+		Sama_1274	0.51	-0.4
1,563,015	+		Sama_1274	0.51	-0.7
1,563,016	-		Sama_1274	0.51	+1.1
1,563,016	-		Sama_1274	0.51	-0.3
1,563,023	+		Sama_1274	0.52	-0.8
1,563,023	+		Sama_1274	0.52	-0.2
1,563,023	+		Sama_1274	0.52	+0.8