Strain Fitness in Shewanella amazonensis SB2B around Sama_1186

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,449,301	+		Sama_1185	0.20	+0.9
1,449,301	+		Sama_1185	0.20	+0.7
1,449,301	+		Sama_1185	0.20	-1.3
1,449,311	-		Sama_1185	0.21	-0.7
1,449,395	+		Sama_1185	0.29	-0.3
1,449,395	+		Sama_1185	0.29	+2.3
1,449,395	+		Sama_1185	0.29	-0.3
1,449,396	-		Sama_1185	0.29	+1.3
1,449,411	+		Sama_1185	0.31	-0.8
1,449,470	+		Sama_1185	0.36	+1.3
1,449,470	+		Sama_1185	0.36	-0.3
1,449,471	-		Sama_1185	0.36	-0.8
1,449,478	+		Sama_1185	0.37	-1.1
1,449,536	+		Sama_1185	0.43	-0.1
1,449,560	+		Sama_1185	0.45	-2.3
1,449,560	+		Sama_1185	0.45	+0.3
1,449,560	+		Sama_1185	0.45	-2.2
1,449,646	+		Sama_1185	0.53	-0.5
1,449,646	+		Sama_1185	0.53	-1.4
1,449,646	+		Sama_1185	0.53	+1.3
1,449,646	+		Sama_1185	0.53	-1.9
1,449,646	+		Sama_1185	0.53	-0.3
1,449,745	+		Sama_1185	0.62	-0.2
1,449,753	-		Sama_1185	0.63	-1.7
1,449,753	-		Sama_1185	0.63	-1.5
1,449,941	+		Sama_1185	0.81	-1.1
1,449,941	+		Sama_1185	0.81	-1.6
1,449,942	-		Sama_1185	0.81	-1.2
1,449,971	+		Sama_1185	0.84	+0.3
1,449,971	+		Sama_1185	0.84	-2.1
1,449,971	+		Sama_1185	0.84	-0.5
1,449,972	-		Sama_1185	0.84	-0.3
1,449,972	-		Sama_1185	0.84	+2.5
1,449,973	+		Sama_1185	0.84	+0.7
1,450,046	+				+0.5
1,450,046	+				+0.3
1,450,074	+				-1.6
1,450,139	+				+1.2
1,450,148	+				-1.2
1,450,149	-				-2.7
1,450,149	-				-0.2
1,450,151	+				-2.1
1,450,151	+				-1.4
1,450,151	+				-0.1
1,450,151	+				-1.1
1,450,151	+				+0.3
1,450,151	+				+1.1
1,450,152	-				-0.7
1,450,152	-				-0.7
1,450,222	+				+0.3
1,450,222	+				-0.3
1,450,223	-				-1.9
1,450,228	-				-0.1
1,450,255	-				+1.4
1,450,271	+				-0.8
1,450,271	+				+1.5
1,450,272	-				-0.1
1,450,303	-				-0.7
1,450,303	-				-1.0
1,450,315	-				-1.0
1,450,315	-				-0.7
1,450,384	-				-1.6
1,450,404	-		Sama_1186	0.11	-0.9
1,450,404	-		Sama_1186	0.11	+0.3
1,450,425	+		Sama_1186	0.13	+1.1
1,450,436	-		Sama_1186	0.14	-2.6
1,450,493	+		Sama_1186	0.19	+1.2
1,450,563	+		Sama_1186	0.24	-0.7
1,450,564	-		Sama_1186	0.25	-2.9
1,450,564	-		Sama_1186	0.25	-0.4
1,450,564	-		Sama_1186	0.25	-1.1
1,450,564	-		Sama_1186	0.25	+0.4
1,450,564	-		Sama_1186	0.25	-0.2
1,450,581	+		Sama_1186	0.26	-0.8
1,450,801	-		Sama_1186	0.44	+0.3
1,450,801	-		Sama_1186	0.44	-0.6
1,450,818	-		Sama_1186	0.46	-1.2
1,450,818	-		Sama_1186	0.46	+1.3
1,450,859	+		Sama_1186	0.49	-0.3
1,450,860	-		Sama_1186	0.49	-0.2
1,450,865	+		Sama_1186	0.50	+1.7
1,450,866	-		Sama_1186	0.50	+2.0
1,450,866	-		Sama_1186	0.50	+1.3
1,450,866	-		Sama_1186	0.50	+0.8
1,450,874	+		Sama_1186	0.50	-0.1
1,450,874	+		Sama_1186	0.50	+1.3
1,451,090	+		Sama_1186	0.69	-1.5
1,451,090	+		Sama_1186	0.69	+1.3
1,451,121	+		Sama_1186	0.71	-0.3
1,451,139	+		Sama_1186	0.73	+1.8
1,451,140	-		Sama_1186	0.73	+0.0
1,451,162	+		Sama_1186	0.75	-0.6
1,451,192	-		Sama_1186	0.77	-1.2
1,451,192	-		Sama_1186	0.77	+0.9
1,451,222	-		Sama_1186	0.80	+1.3
1,451,356	-				+1.6
1,451,442	+				-0.9
1,451,446	+				-0.7
1,451,447	-				-2.3
1,451,447	-				+1.7
1,451,458	-				+0.0
1,451,458	-				+0.6
1,451,515	+				-2.1
1,451,515	+				-1.2
1,451,515	+				+0.9
1,451,516	-				+0.2
1,451,525	-				-1.7
1,451,525	-				-0.6
1,451,552	+				-0.8
1,451,553	-				-1.6
1,451,557	-				-0.1
1,451,583	-				-1.2
1,451,583	-				+0.5
1,451,583	-				+0.3
1,451,613	+				-0.2
1,451,614	-				-1.5
1,451,709	+				-1.7
1,451,709	+				+0.6
1,451,758	+				+0.0
1,451,758	+				+0.7
1,451,758	+				-0.6
1,451,759	-				+1.8
1,451,759	-				-1.1
1,451,759	-				-0.7
1,451,759	-				+0.5
1,451,759	-				+0.8
1,451,765	+				-1.7
1,451,766	-				+3.3
1,451,766	-				-0.9
1,451,785	-				-1.1
1,451,837	+				-3.0
1,451,837	+				-0.4
1,451,837	+				-0.1
1,451,838	-				-0.1
1,451,838	-				-0.3
1,451,941	+		Sama_1187	0.21	+0.6
1,451,941	+		Sama_1187	0.21	+0.7
1,451,941	+		Sama_1187	0.21	-0.8
1,451,941	+		Sama_1187	0.21	-1.6
1,451,941	+		Sama_1187	0.21	+0.9
1,451,941	+		Sama_1187	0.21	-1.5
1,451,941	+		Sama_1187	0.21	+0.3
1,451,941	+		Sama_1187	0.21	-0.1
1,451,942	-		Sama_1187	0.21	+0.3
1,451,942	-		Sama_1187	0.21	-2.3
1,451,942	-		Sama_1187	0.21	+0.5
1,451,942	-		Sama_1187	0.21	-0.3
1,451,942	-		Sama_1187	0.21	-0.1
1,451,942	-		Sama_1187	0.21	+1.5
1,451,942	-		Sama_1187	0.21	-0.1
1,451,986	-		Sama_1187	0.26	-0.1
1,451,989	+		Sama_1187	0.27	-0.7
1,451,990	-		Sama_1187	0.27	+1.8
1,451,990	-		Sama_1187	0.27	+1.3
1,451,990	-		Sama_1187	0.27	-1.4
1,452,009	+		Sama_1187	0.29	+1.4
1,452,034	+		Sama_1187	0.32	+1.0
1,452,035	-		Sama_1187	0.32	-1.1
1,452,056	+		Sama_1187	0.34	-0.3
1,452,056	+		Sama_1187	0.34	-0.4
1,452,056	+		Sama_1187	0.34	+0.3
1,452,124	-		Sama_1187	0.42	-0.5
1,452,285	-		Sama_1187	0.60	-1.1
1,452,305	-		Sama_1187	0.62	-2.4
1,452,308	+		Sama_1187	0.63	+0.4
1,452,309	-		Sama_1187	0.63	+0.9
1,452,337	+		Sama_1187	0.66	+1.4
1,452,382	+		Sama_1187	0.71	+0.7
1,452,383	-		Sama_1187	0.71	-0.0
1,452,383	-		Sama_1187	0.71	-2.0
1,452,383	-		Sama_1187	0.71	-1.2
1,452,396	-		Sama_1187	0.73	+0.5
1,452,396	-		Sama_1187	0.73	-1.6
1,452,444	-		Sama_1187	0.78	-2.2