Strain Fitness in Shewanella amazonensis SB2B around Sama_1183

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,445,476	-				-2.1
1,445,514	-				+0.8
1,445,514	-				-1.2
1,445,527	+		Sama_1182	0.10	-1.3
1,445,527	+		Sama_1182	0.10	-0.1
1,445,555	-		Sama_1182	0.13	-0.7
1,445,678	+		Sama_1182	0.25	-0.3
1,445,679	-		Sama_1182	0.25	+0.5
1,445,761	+		Sama_1182	0.33	+0.3
1,445,761	+		Sama_1182	0.33	-1.2
1,445,762	-		Sama_1182	0.33	-0.1
1,445,762	-		Sama_1182	0.33	-0.9
1,445,762	-		Sama_1182	0.33	-1.8
1,445,762	-		Sama_1182	0.33	-0.6
1,445,765	+		Sama_1182	0.33	-0.2
1,445,765	+		Sama_1182	0.33	-0.4
1,445,765	+		Sama_1182	0.33	+1.1
1,445,766	-		Sama_1182	0.33	-1.7
1,445,793	+		Sama_1182	0.36	-0.1
1,445,794	-		Sama_1182	0.36	+0.1
1,445,794	-		Sama_1182	0.36	+2.7
1,445,814	+		Sama_1182	0.38	-1.4
1,445,815	-		Sama_1182	0.38	-1.6
1,445,815	-		Sama_1182	0.38	-0.8
1,445,924	-		Sama_1182	0.48	-1.2
1,446,068	+		Sama_1182	0.62	+1.3
1,446,131	-		Sama_1182	0.68	-1.4
1,446,162	+		Sama_1182	0.71	-0.6
1,446,424	-				+0.9
1,446,424	-				+3.3
1,446,471	+				+0.3
1,446,471	+				-0.6
1,446,472	-				-0.6
1,446,477	+				-0.6
1,446,535	-				-0.7
1,446,537	+				-0.9
1,446,626	-		Sama_1183	0.17	-0.7
1,446,662	-		Sama_1183	0.21	-1.7
1,446,686	+		Sama_1183	0.24	+0.3
1,446,686	+		Sama_1183	0.24	+3.5
1,446,686	+		Sama_1183	0.24	+0.3
1,446,686	+		Sama_1183	0.24	+0.7
1,446,686	+		Sama_1183	0.24	+0.4
1,446,687	-		Sama_1183	0.24	-0.3
1,446,687	-		Sama_1183	0.24	+0.9
1,446,730	+		Sama_1183	0.28	-0.6
1,446,731	-		Sama_1183	0.28	-0.3
1,446,731	-		Sama_1183	0.28	-2.0
1,446,750	-		Sama_1183	0.30	+1.3
1,446,853	+		Sama_1183	0.41	-0.8
1,446,936	+		Sama_1183	0.50	-1.1
1,446,936	+		Sama_1183	0.50	-0.3
1,447,033	-		Sama_1183	0.61	-1.2
1,447,033	-		Sama_1183	0.61	-0.7
1,447,090	-		Sama_1183	0.67	-1.7
1,447,090	-		Sama_1183	0.67	-1.3
1,447,116	+		Sama_1183	0.70	+0.5
1,447,253	+		Sama_1183	0.84	-0.1
1,447,253	+		Sama_1183	0.84	-1.1
1,447,309	+				-0.3
1,447,309	+				+0.5
1,447,309	+				-1.9
1,447,309	+				-0.4
1,447,582	+		Sama_1184	0.11	-0.3
1,447,582	+		Sama_1184	0.11	+0.4
1,447,583	-		Sama_1184	0.11	-0.6
1,447,583	-		Sama_1184	0.11	+1.3
1,447,613	+		Sama_1184	0.13	-0.7
1,447,752	-		Sama_1184	0.21	-1.1
1,447,859	+		Sama_1184	0.27	-1.7
1,448,034	+		Sama_1184	0.38	+0.3
1,448,035	-		Sama_1184	0.38	-2.2
1,448,126	+		Sama_1184	0.43	-1.7
1,448,127	-		Sama_1184	0.43	+1.7
1,448,188	-		Sama_1184	0.47	+1.3
1,448,285	+		Sama_1184	0.53	-1.7
1,448,286	-		Sama_1184	0.53	+1.3
1,448,338	+		Sama_1184	0.56	-1.2
1,448,339	-		Sama_1184	0.56	-0.5
1,448,370	+		Sama_1184	0.58	+2.5