Strain Fitness in Shewanella amazonensis SB2B around Sama_1173

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,432,011	+		Sama_1172	0.61	+1.1
1,432,122	+		Sama_1172	0.66	-1.8
1,432,122	+		Sama_1172	0.66	-0.9
1,432,129	-		Sama_1172	0.67	-1.6
1,432,168	+		Sama_1172	0.69	-2.5
1,432,169	-		Sama_1172	0.69	+1.2
1,432,313	+		Sama_1172	0.75	-0.2
1,432,313	+		Sama_1172	0.75	+0.1
1,432,313	+		Sama_1172	0.75	-0.5
1,432,314	-		Sama_1172	0.75	-2.4
1,432,314	-		Sama_1172	0.75	-0.3
1,432,314	-		Sama_1172	0.75	+0.0
1,432,314	-		Sama_1172	0.75	+0.2
1,432,371	-		Sama_1172	0.78	-1.6
1,432,371	-		Sama_1172	0.78	-0.6
1,432,371	-		Sama_1172	0.78	-0.2
1,432,499	+		Sama_1172	0.84	+0.2
1,432,499	+		Sama_1172	0.84	-0.2
1,432,500	-		Sama_1172	0.84	-0.3
1,432,500	-		Sama_1172	0.84	-0.6
1,432,500	-		Sama_1172	0.84	-0.8
1,432,500	-		Sama_1172	0.84	-0.3
1,432,500	-		Sama_1172	0.84	+3.2
1,432,685	+				+0.5
1,432,686	-				-2.0
1,432,686	-				-1.2
1,432,686	-				-2.0
1,432,747	+				+0.3
1,432,839	+				-1.3
1,432,839	+				-0.6
1,432,839	+				-0.1
1,432,839	+				+0.2
1,432,839	+				-1.9
1,432,839	+				-1.7
1,432,839	+				-1.2
1,432,840	-				-2.7
1,432,840	-				+1.0
1,432,840	-				-1.3
1,432,840	-				-1.3
1,432,840	-				+0.2
1,432,840	-				-0.1
1,432,840	-				-2.2
1,432,894	-				-0.1
1,432,912	+				-0.1
1,432,912	+				+0.4
1,432,916	+				+0.2
1,432,916	+				+0.0
1,432,916	+				+3.1
1,433,012	-				-0.3
1,433,012	-				-1.5
1,433,057	+		Sama_1173	0.10	-2.0
1,433,057	+		Sama_1173	0.10	-0.9
1,433,058	-		Sama_1173	0.10	+3.0
1,433,058	-		Sama_1173	0.10	+1.0
1,433,068	+		Sama_1173	0.12	-0.3
1,433,071	-		Sama_1173	0.12	-1.2
1,433,071	-		Sama_1173	0.12	-1.1
1,433,071	-		Sama_1173	0.12	-1.9
1,433,095	-		Sama_1173	0.17	+2.2
1,433,128	+		Sama_1173	0.22	-1.3
1,433,128	+		Sama_1173	0.22	-3.3
1,433,128	+		Sama_1173	0.22	-1.1
1,433,129	-		Sama_1173	0.22	+0.2
1,433,129	-		Sama_1173	0.22	-0.3
1,433,129	-		Sama_1173	0.22	+1.2
1,433,129	-		Sama_1173	0.22	+1.2
1,433,129	-		Sama_1173	0.22	-1.6
1,433,313	+		Sama_1173	0.54	-1.8
1,433,313	+		Sama_1173	0.54	-0.9
1,433,369	+		Sama_1173	0.64	-2.1
1,433,370	-		Sama_1173	0.64	-0.6
1,433,374	-		Sama_1173	0.65	-0.6
1,433,387	-		Sama_1173	0.67	-0.3
1,433,387	-		Sama_1173	0.67	-0.3
1,433,387	-		Sama_1173	0.67	-1.9
1,433,407	-		Sama_1173	0.70	+0.5
1,433,530	+				+1.5
1,433,531	-				-1.0
1,433,583	+				+0.9
1,433,630	-				+2.2
1,433,630	-				-0.1
1,433,633	+				+0.4
1,433,640	+				+0.5
1,433,641	-				-0.0
1,433,654	+				+0.1
1,433,654	+				+0.1
1,433,654	+				-2.3
1,433,654	+				-2.1
1,433,658	+				-1.4
1,433,658	+				+1.2
1,433,659	-				-1.9
1,433,692	+				+1.2
1,433,716	+				-0.1
1,433,717	-				+0.3
1,433,731	+				+0.1
1,433,732	-				+1.2
1,433,732	-				-2.8
1,433,753	+				-0.5
1,433,754	-				-2.7
1,433,922	+		Sama_1174	0.20	-0.5
1,433,923	-		Sama_1174	0.21	-0.5
1,433,923	-		Sama_1174	0.21	+0.7
1,433,923	-		Sama_1174	0.21	-1.8
1,433,923	-		Sama_1174	0.21	-0.9
1,434,042	+		Sama_1174	0.29	-0.9
1,434,042	+		Sama_1174	0.29	-1.8
1,434,043	-		Sama_1174	0.29	-3.1
1,434,043	-		Sama_1174	0.29	-2.7
1,434,151	+		Sama_1174	0.37	+2.2
1,434,152	-		Sama_1174	0.37	-1.5
1,434,152	-		Sama_1174	0.37	-1.0
1,434,214	+		Sama_1174	0.42	+1.4
1,434,214	+		Sama_1174	0.42	+0.5
1,434,214	+		Sama_1174	0.42	+0.7
1,434,214	+		Sama_1174	0.42	-0.3
1,434,214	+		Sama_1174	0.42	-0.4
1,434,214	+		Sama_1174	0.42	-0.2
1,434,214	+		Sama_1174	0.42	-0.3
1,434,214	+		Sama_1174	0.42	+0.6
1,434,214	+		Sama_1174	0.42	-0.6
1,434,215	-		Sama_1174	0.42	+0.2
1,434,215	-		Sama_1174	0.42	-1.6
1,434,215	-		Sama_1174	0.42	-1.9
1,434,215	-		Sama_1174	0.42	-0.8
1,434,215	-		Sama_1174	0.42	+2.3
1,434,215	-		Sama_1174	0.42	+1.0
1,434,215	-		Sama_1174	0.42	-0.6
1,434,215	-		Sama_1174	0.42	-1.1
1,434,251	-		Sama_1174	0.45	-0.3
1,434,271	+		Sama_1174	0.46	-1.0
1,434,271	+		Sama_1174	0.46	+0.1
1,434,271	+		Sama_1174	0.46	-1.8
1,434,271	+		Sama_1174	0.46	+0.8
1,434,272	-		Sama_1174	0.46	+0.2
1,434,272	-		Sama_1174	0.46	-1.4
1,434,272	-		Sama_1174	0.46	-1.1
1,434,272	-		Sama_1174	0.46	+0.7
1,434,310	-		Sama_1174	0.49	+0.3
1,434,369	-		Sama_1174	0.53	-0.3
1,434,435	+		Sama_1174	0.58	-0.3
1,434,483	+		Sama_1174	0.61	-3.0
1,434,483	+		Sama_1174	0.61	-1.8
1,434,484	-		Sama_1174	0.62	-1.2