Strain Fitness in Shewanella amazonensis SB2B around Sama_1154

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,403,348	+				-2.0
1,403,348	+				+0.2
1,403,456	+	rnhB	Sama_1153	0.19	-0.5
1,403,456	+	rnhB	Sama_1153	0.19	+0.0
1,403,532	+	rnhB	Sama_1153	0.31	+0.1
1,403,543	+	rnhB	Sama_1153	0.33	-0.1
1,403,543	+	rnhB	Sama_1153	0.33	-0.6
1,403,550	-	rnhB	Sama_1153	0.34	-0.1
1,403,603	+	rnhB	Sama_1153	0.43	+0.4
1,403,603	+	rnhB	Sama_1153	0.43	+0.6
1,403,603	+	rnhB	Sama_1153	0.43	-1.7
1,403,604	-	rnhB	Sama_1153	0.43	+1.3
1,403,604	-	rnhB	Sama_1153	0.43	+0.2
1,403,606	+	rnhB	Sama_1153	0.43	-0.7
1,403,710	+	rnhB	Sama_1153	0.60	-2.1
1,403,710	+	rnhB	Sama_1153	0.60	-0.1
1,403,725	+	rnhB	Sama_1153	0.62	+0.2
1,403,981	+				+3.8
1,403,981	+				+1.6
1,403,982	-				-0.6
1,403,982	-				-0.6
1,403,982	-				+0.0
1,404,002	+				-0.4
1,404,002	+				-1.1
1,404,003	-				-0.1
1,404,005	+				-0.8
1,404,005	+				-1.6
1,404,043	-				-0.1
1,404,060	+				-0.4
1,404,060	+				-1.8
1,404,072	+				+0.2
1,407,588	+				-2.0