Strain Fitness in Shewanella amazonensis SB2B around Sama_1086

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,312,570	+		Sama_1084	0.79	-1.0
1,312,570	+		Sama_1084	0.79	-1.7
1,312,639	+		Sama_1084	0.83	-1.1
1,312,639	+		Sama_1084	0.83	-0.6
1,312,639	+		Sama_1084	0.83	+0.0
1,312,639	+		Sama_1084	0.83	-0.7
1,312,639	+		Sama_1084	0.83	+0.7
1,312,639	+		Sama_1084	0.83	-2.4
1,312,719	+		Sama_1084	0.88	-0.4
1,312,719	+		Sama_1084	0.88	+0.9
1,312,720	-		Sama_1084	0.88	+1.6
1,312,749	+		Sama_1084	0.90	-0.1
1,312,861	+				-2.4
1,312,861	+				+0.4
1,312,861	+				-0.3
1,312,861	+				+0.5
1,312,861	+				-0.1
1,312,861	+				+0.5
1,312,861	+				-0.6
1,312,862	-				-1.3
1,312,862	-				-0.6
1,312,862	-				-1.0
1,312,862	-				-1.3
1,312,862	-				-0.2
1,312,862	-				-0.3
1,312,865	+				-0.1
1,312,865	+				+0.0
1,312,866	-				+0.0
1,312,968	-				+1.0
1,312,968	-				-0.7
1,312,997	+				+2.0
1,313,028	-				-0.9
1,313,038	+				+0.0
1,313,060	+				-0.9
1,313,060	+				-0.6
1,313,060	+				-1.4
1,313,061	-				-1.0
1,313,193	+		Sama_1085	0.14	-0.8
1,313,193	+		Sama_1085	0.14	+0.2
1,313,194	-		Sama_1085	0.14	-0.4
1,313,194	-		Sama_1085	0.14	+0.6
1,313,194	-		Sama_1085	0.14	-1.7
1,313,221	-		Sama_1085	0.31	-1.3
1,313,243	-		Sama_1085	0.44	-0.3
1,313,243	-		Sama_1085	0.44	-0.9
1,313,261	-		Sama_1085	0.56	-2.4
1,313,319	+				-2.0
1,313,319	+				-0.6
1,313,380	+				+0.4
1,313,402	-				+0.0
1,313,416	-				-0.6
1,313,460	-				-1.3
1,313,460	-				-0.4
1,313,460	-				+0.3
1,313,478	+				-1.7
1,313,479	-				-1.1
1,313,566	+				-0.3
1,313,566	+				+1.3
1,313,725	-		Sama_1086	0.14	-1.3
1,313,804	-		Sama_1086	0.20	-1.6
1,313,858	-		Sama_1086	0.24	-2.5
1,313,895	+		Sama_1086	0.26	-1.6
1,313,895	+		Sama_1086	0.26	-0.1
1,313,896	-		Sama_1086	0.26	-1.1
1,313,896	-		Sama_1086	0.26	-1.0
1,313,896	-		Sama_1086	0.26	-1.1
1,314,004	+		Sama_1086	0.34	-0.7
1,314,004	+		Sama_1086	0.34	-1.1
1,314,005	-		Sama_1086	0.34	-1.4
1,314,005	-		Sama_1086	0.34	-0.1
1,314,070	+		Sama_1086	0.39	-1.0
1,314,071	-		Sama_1086	0.39	-1.0
1,314,178	+		Sama_1086	0.47	+1.0
1,314,178	+		Sama_1086	0.47	+1.8
1,314,178	+		Sama_1086	0.47	+0.4
1,314,180	+		Sama_1086	0.47	+0.7
1,314,181	-		Sama_1086	0.47	+2.1
1,314,181	-		Sama_1086	0.47	-0.5
1,314,181	-		Sama_1086	0.47	-1.4
1,314,181	-		Sama_1086	0.47	+0.6
1,314,181	-		Sama_1086	0.47	+0.2
1,314,244	+		Sama_1086	0.52	-1.5
1,314,244	+		Sama_1086	0.52	+0.2
1,314,244	+		Sama_1086	0.52	-2.0
1,314,244	+		Sama_1086	0.52	-1.3
1,314,244	+		Sama_1086	0.52	+0.4
1,314,244	+		Sama_1086	0.52	-0.5
1,314,244	+		Sama_1086	0.52	+0.7
1,314,245	-		Sama_1086	0.52	+0.6
1,314,245	-		Sama_1086	0.52	+1.9
1,314,245	-		Sama_1086	0.52	-1.7
1,314,445	+		Sama_1086	0.67	-0.8
1,314,446	-		Sama_1086	0.67	+0.3
1,314,446	-		Sama_1086	0.67	+0.1
1,314,446	-		Sama_1086	0.67	+0.4
1,314,450	-		Sama_1086	0.67	+0.3
1,314,450	-		Sama_1086	0.67	+1.1
1,314,450	-		Sama_1086	0.67	+0.2
1,314,450	-		Sama_1086	0.67	+1.4
1,314,485	-		Sama_1086	0.69	+0.0
1,314,587	+		Sama_1086	0.77	+0.3
1,314,588	-		Sama_1086	0.77	+0.4
1,314,588	-		Sama_1086	0.77	+0.4
1,314,588	-		Sama_1086	0.77	+0.2
1,314,588	-		Sama_1086	0.77	-1.3
1,314,596	-		Sama_1086	0.78	-1.4
1,314,652	+		Sama_1086	0.82	+0.0
1,314,652	+		Sama_1086	0.82	+1.0
1,314,652	+		Sama_1086	0.82	-1.9
1,314,653	-		Sama_1086	0.82	-3.5
1,314,739	+		Sama_1086	0.88	+0.2
1,314,739	+		Sama_1086	0.88	+0.6
1,314,739	+		Sama_1086	0.88	-1.6
1,314,739	+		Sama_1086	0.88	-1.9
1,314,739	+		Sama_1086	0.88	-0.4
1,314,740	-		Sama_1086	0.88	+0.0
1,314,740	-		Sama_1086	0.88	-1.3
1,314,740	-		Sama_1086	0.88	-0.5
1,314,740	-		Sama_1086	0.88	-0.4
1,314,777	+				-2.7
1,314,777	+				-1.0
1,314,777	+				+1.4
1,314,815	-				+1.8
1,314,815	-				-0.7
1,314,852	+				+0.4
1,314,852	+				+1.0
1,314,852	+				-1.0
1,314,853	-				+1.1
1,315,129	+		Sama_1087	0.21	+1.5
1,315,149	+		Sama_1087	0.24	-0.2
1,315,149	+		Sama_1087	0.24	-0.4
1,315,149	+		Sama_1087	0.24	-2.1
1,315,149	+		Sama_1087	0.24	-1.8
1,315,149	+		Sama_1087	0.24	+0.1
1,315,149	+		Sama_1087	0.24	+0.0
1,315,149	+		Sama_1087	0.24	-0.3
1,315,149	+		Sama_1087	0.24	-1.7
1,315,149	+		Sama_1087	0.24	-0.1
1,315,150	-		Sama_1087	0.25	+3.4
1,315,150	-		Sama_1087	0.25	-0.6
1,315,150	-		Sama_1087	0.25	-0.6
1,315,150	-		Sama_1087	0.25	+0.9
1,315,150	-		Sama_1087	0.25	-0.0
1,315,153	+		Sama_1087	0.25	-0.3
1,315,153	+		Sama_1087	0.25	-0.6
1,315,153	+		Sama_1087	0.25	-1.1
1,315,153	+		Sama_1087	0.25	+0.0
1,315,153	+		Sama_1087	0.25	-1.7
1,315,153	+		Sama_1087	0.25	-0.6
1,315,153	+		Sama_1087	0.25	-0.2
1,315,153	+		Sama_1087	0.25	-2.5
1,315,153	+		Sama_1087	0.25	-2.3
1,315,153	+		Sama_1087	0.25	+0.0
1,315,153	+		Sama_1087	0.25	+0.4
1,315,154	-		Sama_1087	0.25	-1.1
1,315,154	-		Sama_1087	0.25	-1.3
1,315,154	-		Sama_1087	0.25	+0.4
1,315,154	-		Sama_1087	0.25	-1.3
1,315,154	-		Sama_1087	0.25	-1.7
1,315,154	-		Sama_1087	0.25	+2.4
1,315,154	-		Sama_1087	0.25	-0.2
1,315,154	-		Sama_1087	0.25	+1.4
1,315,154	-		Sama_1087	0.25	+3.6
1,315,154	-		Sama_1087	0.25	-1.4
1,315,154	-		Sama_1087	0.25	+0.1
1,315,154	-		Sama_1087	0.25	-2.1
1,315,154	-		Sama_1087	0.25	-0.3
1,315,154	-		Sama_1087	0.25	-2.4
1,315,154	-		Sama_1087	0.25	-0.9
1,315,154	-		Sama_1087	0.25	-2.0
1,315,154	-		Sama_1087	0.25	-0.3
1,315,154	-		Sama_1087	0.25	-0.2
1,315,154	-		Sama_1087	0.25	-0.9
1,315,154	-		Sama_1087	0.25	+0.3
1,315,157	+		Sama_1087	0.26	+1.0
1,315,158	-		Sama_1087	0.26	-0.1
1,315,158	-		Sama_1087	0.26	+1.3
1,315,158	-		Sama_1087	0.26	+0.9
1,315,168	-		Sama_1087	0.27	-0.7
1,315,192	-		Sama_1087	0.31	-1.0
1,315,192	-		Sama_1087	0.31	+0.9
1,315,192	-		Sama_1087	0.31	+1.7
1,315,209	+		Sama_1087	0.33	-0.3
1,315,209	+		Sama_1087	0.33	+0.3
1,315,209	+		Sama_1087	0.33	-0.6
1,315,209	+		Sama_1087	0.33	-0.9
1,315,210	-		Sama_1087	0.33	+0.1
1,315,210	-		Sama_1087	0.33	-1.0
1,315,210	-		Sama_1087	0.33	-0.6
1,315,232	-		Sama_1087	0.37	-0.1
1,315,305	+		Sama_1087	0.48	-1.1
1,315,311	+		Sama_1087	0.49	-1.4
1,315,312	-		Sama_1087	0.49	-1.1
1,315,312	-		Sama_1087	0.49	-2.2
1,315,434	+		Sama_1087	0.67	-0.8
1,315,434	+		Sama_1087	0.67	+0.2
1,315,434	+		Sama_1087	0.67	+1.3
1,315,434	+		Sama_1087	0.67	-1.8
1,315,434	+		Sama_1087	0.67	+0.2
1,315,435	-		Sama_1087	0.67	-3.2
1,315,435	-		Sama_1087	0.67	-0.6
1,315,436	+		Sama_1087	0.67	-0.8
1,315,436	+		Sama_1087	0.67	+0.2
1,315,436	+		Sama_1087	0.67	-3.1
1,315,436	+		Sama_1087	0.67	+0.6
1,315,437	-		Sama_1087	0.67	-1.1
1,315,437	-		Sama_1087	0.67	-0.6
1,315,437	-		Sama_1087	0.67	-1.0
1,315,437	-		Sama_1087	0.67	+0.7
1,315,437	-		Sama_1087	0.67	+0.1
1,315,437	-		Sama_1087	0.67	-1.0
1,315,461	-		Sama_1087	0.71	-1.4
1,315,461	-		Sama_1087	0.71	-0.3
1,315,477	+		Sama_1087	0.73	-1.0
1,315,477	+		Sama_1087	0.73	+0.8
1,315,478	-		Sama_1087	0.74	-2.0
1,315,478	-		Sama_1087	0.74	-0.8
1,315,488	-		Sama_1087	0.75	-1.9
1,315,488	-		Sama_1087	0.75	-0.3
1,315,571	+		Sama_1087	0.87	+0.8
1,315,572	-		Sama_1087	0.88	-0.6
1,315,589	+				-2.8
1,315,590	-				+2.2
1,315,641	+				+0.6
1,315,641	+				-0.8
1,315,642	-				+0.8
1,315,642	-				-0.4
1,315,659	+				+0.1
1,315,659	+				-3.4
1,315,659	+				-2.0
1,315,659	+				-0.3
1,315,659	+				+0.2
1,315,659	+				-1.9
1,315,660	-				+1.9
1,315,660	-				+0.5
1,315,660	-				-0.3
1,315,660	-				-1.4
1,315,660	-				-1.5
1,315,660	-				+0.3
1,315,660	-				+1.0
1,315,668	-				+1.2
1,315,668	-				+0.5
1,315,880	-		Sama_1088	0.34	-2.1