Strain Fitness in Shewanella amazonensis SB2B around Sama_0843

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
1,027,402	-				-1.8
1,027,443	-				+0.1
1,027,443	-				+1.4
1,027,443	-				-0.4
1,027,443	-				-2.4
1,027,465	+				-3.0
1,027,465	+				-1.7
1,027,466	-				-0.7
1,027,466	-				-1.1
1,027,466	-				-0.9
1,027,496	+				+0.5
1,027,496	+				-0.4
1,027,496	+				-0.3
1,027,496	+				-0.5
1,027,496	+				-0.3
1,027,496	+				-2.5
1,027,496	+				-1.6
1,027,496	+				-0.9
1,027,496	+				+0.3
1,027,496	+				-0.4
1,027,496	+				+0.3
1,027,497	-				+0.8
1,027,497	-				+1.4
1,027,497	-				+0.6
1,027,497	-				+0.3
1,027,497	-				+0.1
1,027,497	-				-0.9
1,027,504	+				-2.6
1,027,504	+				+1.3
1,027,505	-				-1.0
1,027,541	-				+1.2
1,027,543	+				-2.3
1,027,543	+				-2.7
1,027,543	+				+0.5
1,027,543	+				-1.3
1,027,544	-				-2.2
1,027,544	-				-1.9
1,027,544	-				-1.0
1,027,570	-				+0.8
1,027,629	+				+0.5
1,027,673	+		Sama_0842	0.14	-1.1
1,027,673	+		Sama_0842	0.14	-2.5
1,027,674	-		Sama_0842	0.14	+0.9
1,027,674	-		Sama_0842	0.14	-0.4
1,027,674	-		Sama_0842	0.14	+0.4
1,027,674	-		Sama_0842	0.14	-2.4
1,027,674	-		Sama_0842	0.14	+1.5
1,027,674	-		Sama_0842	0.14	+2.7
1,027,677	+		Sama_0842	0.15	+0.6
1,027,678	-		Sama_0842	0.15	-1.5
1,027,678	-		Sama_0842	0.15	-1.5
1,027,928	+		Sama_0842	0.46	-1.9
1,028,042	-		Sama_0842	0.60	-1.1
1,028,197	+		Sama_0842	0.79	+0.1
1,028,197	+		Sama_0842	0.79	-0.1
1,028,197	+		Sama_0842	0.79	+0.9
1,028,197	+		Sama_0842	0.79	-1.1
1,028,197	+		Sama_0842	0.79	-0.2
1,028,197	+		Sama_0842	0.79	+0.7
1,028,197	+		Sama_0842	0.79	-0.3
1,028,198	-		Sama_0842	0.79	+1.0
1,028,198	-		Sama_0842	0.79	-1.9
1,028,198	-		Sama_0842	0.79	+0.8
1,028,198	-		Sama_0842	0.79	+0.7
1,028,198	-		Sama_0842	0.79	-0.5
1,028,217	+		Sama_0842	0.82	-2.1
1,028,217	+		Sama_0842	0.82	+0.0
1,028,217	+		Sama_0842	0.82	-0.8
1,028,218	-		Sama_0842	0.82	-1.1
1,028,218	-		Sama_0842	0.82	-1.3
1,028,219	+		Sama_0842	0.82	-0.5
1,028,219	+		Sama_0842	0.82	+0.2
1,028,219	+		Sama_0842	0.82	+0.1
1,028,220	-		Sama_0842	0.82	-0.7
1,028,220	-		Sama_0842	0.82	+2.1
1,028,293	+				-0.0
1,028,293	+				-0.5
1,028,294	-				+0.1
1,028,294	-				+0.7
1,028,314	+				-1.1
1,028,704	+				-0.1
1,028,705	-				-0.7
1,028,724	+				-1.8
1,028,725	-				-0.9
1,028,767	+				-1.3
1,028,791	-				-2.6
1,028,791	-				-0.3
1,028,791	-				+0.0
1,028,839	+		Sama_0844	0.11	+0.9
1,028,839	+		Sama_0844	0.11	-1.8
1,028,840	-		Sama_0844	0.11	+1.1
1,028,851	-		Sama_0844	0.13	-1.9
1,028,855	-		Sama_0844	0.14	-0.3
1,028,855	-		Sama_0844	0.14	+0.9
1,028,855	-		Sama_0844	0.14	-1.8
1,028,906	+		Sama_0844	0.26	+0.7
1,028,907	-		Sama_0844	0.27	-1.7
1,028,907	-		Sama_0844	0.27	+1.2
1,028,907	-		Sama_0844	0.27	-0.7
1,028,907	-		Sama_0844	0.27	+1.1
1,029,027	-		Sama_0844	0.55	+0.1
1,029,147	+		Sama_0844	0.83	-0.1
1,029,148	-		Sama_0844	0.84	-0.4
1,029,149	+		Sama_0844	0.84	-1.3
1,029,149	+		Sama_0844	0.84	-0.7
1,029,150	-		Sama_0844	0.84	-0.8
1,029,150	-		Sama_0844	0.84	+0.1
1,029,150	-		Sama_0844	0.84	-0.1
1,029,166	+		Sama_0844	0.88	-0.0
1,029,200	-				+0.3
1,029,228	-				+0.8
1,029,482	+		Sama_0845	0.56	-0.6
1,029,483	-		Sama_0845	0.56	+0.7
1,029,483	-		Sama_0845	0.56	-0.9
1,029,529	+		Sama_0845	0.66	-0.5
1,029,546	+		Sama_0845	0.70	-1.5
1,029,546	+		Sama_0845	0.70	-2.2
1,029,547	-		Sama_0845	0.70	-0.9
1,029,608	+		Sama_0845	0.83	+0.7
1,029,631	+		Sama_0845	0.89	-0.7
1,029,631	+		Sama_0845	0.89	-1.0
1,029,669	+				-1.9
1,029,670	-				-0.6